Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1760 ATGATGCACCTCTCCCTCAGTCTCATGCTGTCATGCACTATCTTTAATGATACTATTCAGAATCAAAAGACAGGAGCCTCAGCCATCTCAACAATTTCTTCCCCTCCCGTGTTTTCTCCTCTGCCACACAGCTTCACCATTTGTTCTGATATTCCTCAGAATATAGAAATGGAAGATGAGGAAAAAGCAGCCAAGTTTGGAGGAAGCCAAGAAGAAGATGCAACTTCAAGAGTTTTTCCTTGTCTGTTCTGTTCAAGAAAGTTTTGCAGTTCACAAGCCTTAGGAGGACACCAAAATGCCCACAAGAAAGAAAGAACAGCCGCAAGAAAGGCAAAAAGGGTTTCAGAATACCCTTATGTTTCCTTTGCTTCCCCCTTGATGTCACCCCCTATGGTCTTTGATCCAACCCATCATCTGGGTATTTTGAACCCTTCCACGTTCATCACTTCCCATGCTTCAAATTTTGGTTATTTCAAAACTCATCAAATTTCGGAACAATTTGGATCAAACGGTGCTCCTAGATTCGGGAATTTCCTGTTTTCTGAGGGAAGTTGTTCAAGCAGGCGATTCTGTGAAGACGATGAGAAAAGTTTTGTCAATTGGAAAAGGAATCAAAACCTTCGAATTAGGAATAATGGTAAAGAGAATGATCAAAATCTTGATTTGTCTCTCCATTTATAG 681 0.4082 MMHLSLSLMLSCTIFNDTIQNQKTGASAISTISSPPVFSPLPHSFTICSDIPQNIEMEDEEKAAKFGGSQEEDATSRVFPCLFCSRKFCSSQALGGHQNAHKKERTAARKAKRVSEYPYVSFASPLMSPPMVFDPTHHLGILNPSTFITSHASNFGYFKTHQISEQFGSNGAPRFGNFLFSEGSCSSRRFCEDDEKSFVNWKRNQNLRIRNNGKENDQNLDLSLHL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1760 226 Gene3D Classic Zinc Finger 57 121 - -
Glsi07g1760 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Glsi07g1760 226 PANTHER ZINC FINGER PROTEIN JAGGED 42 226 IPR045320 GO:0003700
Glsi07g1760 226 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1760 Glsi-ChrGlsi07 58833553 58834416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1760 55 226 C2H2 Transcription Factor Family AT5G48890 39.205 3.65e-17 74.3