LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi07g1759	ATGCTGTATTTCGAGAATAGCAAAAGATCCGTGTCCACACCTCTACGTGTAGTGACGGGTTGTTTGGAGGAAAAGTTATCTATCACATGTCACTCTTGGAAGTACGCAAACGGATACGTGTCCTTCTCTCAATCAACCCCCACTGCAGCTTCTTCACTTACTCCATTCTTACGTGTTCCCACTCCCTTTTGCAGCGAATCCAGATCAGCACCGTCAATATCGCTCGCCGGAGTCGACGAGGCGGCAATGGCGGACTTGCCTGGAATTCGCCGGAGCTCTTCTTCAAGTTCCACCAGTTCGAGCGACCTCTCCGTCAGATTTGAGCGAGAAGTAGGTGTTGGACGCGGAAGAAGTAGCAAGCATGATGTTAGAGATGTCGGCAACAGAGTTCCAGTTGGTAATGGTAGCGGTAGCTCTTCAGACATTTCTGAAAGGGGCTTGTCTAAAGTGAACACGGTGCCAGCAGAAATATCACGTGCAGATAAGTTGGAGTCATGTCCACGTCAGTTTAAGTTGGAAAGGTTGAAAAAAGAGAAGCAGAGACATCTGTGGCCTGAAAATGCAGCACAGATTTTTTATGAAAAATTTCCTGTTCAGAAGCTTAGATTGTTGAGTAGAATAGCTACCGTAAAAGATGATGGAACTGTAGAATTTGAAGTTCCAGGAGATGTAGAACCTGAAGCTCTTGGCTCTCCATCCAAACATGCACACAATGTTGTTGATGATGATTCACTTGATGCAACAGACCTTCAATGCATACCACCATTACAGATAGTGATGCTTATTGTTGGGACACGTGGAGACGTGCAGCCATTTATTGCAATAGGAAAACATTTGCAGGATCATGGCCATCGTGTTAGGTTAGCAACTCATTCAAATTTCAAGGAGTTTGTCTTGACATCTGGGTTGGAGTTTTATCCTTTAGGAGGCGATCCAAAAGTCCTTGCTGGTTATATGGTTAAAAATAAGGGCTTCCTGCCCTCAGGACCTTCTGAGATACATATTCAACGAAATCAAATCAAAGAAATCATTAACTCTTTGCTTCCAGCTTGTCAAGACCTTGATATTGATTCTGGCATTCCCTTCAAAGCTGATGCAATCATTGCCAATCCCCCAGCATATGGGCATACCCATGTGGCAGAGGCTCTGAAAATACCAATACATATTTTTTTTACAATGCCATGGACGCCAACTAGTGAATTTCCACATCCTTTGTCCCGTGTAAAGCAACCAGCTGCTTATAGGCTTTCGTATCAAATTGTTGACTCATTGATTTGGCTGGGAATACGAGACATGATTAATGATTTTAGAAAGAAAAAGTTGAAGCTAAGACCAGTCACGTATTTAAGTGGTTCACAAGGCTCTGAAAGTGATGTGCCGCATGCATACATATGGAGTCCTCACCTTGTTCCTAAGCCAAAAGATTGGGGACCAAAAGTTGATGTTGTTGGGTTTTGCTTCCTTGATCTTGCATCAAACTATGAACCTCCGGAGTCCCTTGTAAAATGGCTTGAAAAGGGTGACAAGCCTATTTACGTAGGATTTGGTAGCCTGCCTGTTCAAGAACCGGAAAAAATGACTCAAATAATAGTAGAAGCACTGGAAAAAACTGGACGGAGGGGCATCATTAATAAAGGATGGGGAGGTCTTGGGAATTTGGCAGAACCAAAGGACTCTATATACTTATTGGATAATTGCCCTCATGATTGGCTATTTTTACGCTGCAAGGCTGTGGTGCATCATGGAGGTGCAGGAACAACAGCCGCGGGGCTAAAGGCTGCATGCCCAACAACCATAGTTCCATTCTTTGGTGATCAACCATTTTGGGGTGAGAGAGTACATGCCAGAGGAGTTGGTCCAGCGCCCATCCCAGTGGATGAGTTTTCACTTCCCAAGTTGGTTGACGCAATAAATTTTATGCTAGATCCCAAGGTAAAGGACTGTGCACTTGAAATTGCTAAGGCCATGGAAAATGAAGATGGGGTGGCCGGAGCTGTAAAAGCATTCTTTAAGCATCTTCCTCGAAGTAAGCCAGAACCTGAATCAAAACCGATGCCATCAAGTGTTTTCTCTGTAGGTAGATGTTTTGGTTGTTCCTGA	2100	0.441	MLYFENSKRSVSTPLRVVTGCLEEKLSITCHSWKYANGYVSFSQSTPTAASSLTPFLRVPTPFCSESRSAPSISLAGVDEAAMADLPGIRRSSSSSSTSSSDLSVRFEREVGVGRGRSSKHDVRDVGNRVPVGNGSGSSSDISERGLSKVNTVPAEISRADKLESCPRQFKLERLKKEKQRHLWPENAAQIFYEKFPVQKLRLLSRIATVKDDGTVEFEVPGDVEPEALGSPSKHAHNVVDDDSLDATDLQCIPPLQIVMLIVGTRGDVQPFIAIGKHLQDHGHRVRLATHSNFKEFVLTSGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIHIQRNQIKEIINSLLPACQDLDIDSGIPFKADAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTSEFPHPLSRVKQPAAYRLSYQIVDSLIWLGIRDMINDFRKKKLKLRPVTYLSGSQGSESDVPHAYIWSPHLVPKPKDWGPKVDVVGFCFLDLASNYEPPESLVKWLEKGDKPIYVGFGSLPVQEPEKMTQIIVEALEKTGRRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPAPIPVDEFSLPKLVDAINFMLDPKVKDCALEIAKAMENEDGVAGAVKAFFKHLPRSKPEPESKPMPSSVFSVGRCFGCS	699

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi07g1759	699	Gene3D	Glycogen Phosphorylase B;	258	661	-	-
	Glsi07g1759	699	MobiDBLite	consensus disorder prediction	132	147	-	-
	Glsi07g1759	699	FunFam	Sterol 3-beta-glucosyltransferase UGT80A2	258	488	-	-
	Glsi07g1759	699	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	258	672	-	-
	Glsi07g1759	699	Pfam	Glycosyltransferase family 28 N-terminal domain	258	402	IPR004276	GO:0005975\|GO:0016758\|GO:0030259
	Glsi07g1759	699	PANTHER	STEROL 3-BETA-GLUCOSYLTRANSFERASE	170	683	-	-
	Glsi07g1759	699	MobiDBLite	consensus disorder prediction	112	127	-	-
	Glsi07g1759	699	CDD	GT1_Gtf-like	258	672	IPR002213	GO:0008194
	Glsi07g1759	699	Gene3D	Glycogen Phosphorylase B;	487	656	-	-
	Glsi07g1759	699	FunFam	Sterol 3-beta-glucosyltransferase UGT80A2	489	656	-	-
	Glsi07g1759	699	MobiDBLite	consensus disorder prediction	112	147	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi07g1759	Glsi-ChrGlsi07	58812124	58829497	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi07g1759	168	699	Glycosyltransferase	AT3G07020	77.509	0.0	856