Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1756 ATGTATTATGCGGTTCTTCTTGTTGCTATTCTTCTTGTTTCACTTGCGATTCTTTTTCTGCAGATTTTCTCTCATCCTTCAACCTCTGATTTAGCAGCAGAATACCTTCCCGGCTTCCAAGGCCCCCTTCCTTTTCAACTTGAAACTGGGTATGTGGGAGTAGGGGAATCAGGGAAGGATGCACAACTGTTCTACTATTTTATTAAGTCAGAAGACAACCCTAAGGAGCATCCTCTTATTCTTTGGATAAGTGGTGGTCCTGCAGGTCCCCTTGCATTTAAAGTTGAGGAATACAATGGGAGCCTGCCTAATCTGGTACTGAGACCACAACCTTGGACAAAGGCATGTAGCATGATTTTTGTAGATTTGCCCGCGGGCACTGGCTTCTCTTATGCAACAACAAAAGCCAATCAACGAAGTGACTGGAAAACAGTTCACCATGCCCATCAATTTCTTAGAAAGTGGCTGGTGGATCACCCAGAATTCCTCTCGAATGAAGTGTACATTGGAGCTGAGTCATACTCTGGCATTATTGTCCCTCCAATTGTTCAAGAAATTTCAAATGGAAATGAAAATGGTGTTCAACCATTGATAAATCTCCAGGGATATCTACTGGGCAACCCACTAACGACTCGCACCGAAGAAAACTATGCAGTCCCATTTTTTCATGGAAAGGGAATTATTCCTGACGAACTCTACACGCTCACTTCAAAACTTAATGGGTTTCATGTTTTGGAACCCCAATGCGAGACCGATTCACCTGAGCCACATGAAGATCTTTTTAGGAGATCTCTGACTGGGAAGTCTCAGAAGTTTCTTAGATCTCATCTCACATTGCCTCCGTCAAGTTGTCGGAGTTATGCATATTTATTAAGCAGTTATTGGGCCAATGATGACAAAGTTCGCAACGCACTGCATGTTAGAAAGGGAACTATAAAGAAATGGGAACGTTGTAACTTTGGGGACCTTGAATATGAGATTCCGAGCAGCTTTGAATATCATTTAAATCTCAGTAAAAAAGGCTATCGTTCCTTGATATACAGTGGGGATCATGATCCAGGTGTTCCTTTCATGGCGACTCAAGCGTGGATTAGAGCTTTAAATTACTCCATTGTGGATGATTGGAGGCCATGGATTGTAAGAGGTCAAGTTGCAGGATACACAAGGACTTACTCCAATAAGATGACATTTGCAACTGTGAAGGGTGCAGGACATCTAGCCCCTGAGTACAAGCCTGAAGAGAGCTTTGCCATGTTCACTAGGTGGATCTCTAACACGCCTTTAATGTCTTTCGGAAATTTTGGAGTCCTCAACCTCTTGAGCTTAGGTTTCTTTGTGATCAAATCTTACTCCCATTCATGGACTGAGGATATTGTCAATAACGGGTCCTGTTTTTGGGATGAATCTTTTATTGAGGTGAGGAAATGGACGACAAACTTCAATCCTGACTCTGCTTTGAAAGATGCTACTACTGCTCTTTGGGTGGAGGCACACCACCTGCCAAGAGCAAGTGTGTCATACCCTGCACATGGGGTACTACCCCCTACCCCTGTTTGA 1557 0.4335 MYYAVLLVAILLVSLAILFLQIFSHPSTSDLAAEYLPGFQGPLPFQLETGYVGVGESGKDAQLFYYFIKSEDNPKEHPLILWISGGPAGPLAFKVEEYNGSLPNLVLRPQPWTKACSMIFVDLPAGTGFSYATTKANQRSDWKTVHHAHQFLRKWLVDHPEFLSNEVYIGAESYSGIIVPPIVQEISNGNENGVQPLINLQGYLLGNPLTTRTEENYAVPFFHGKGIIPDELYTLTSKLNGFHVLEPQCETDSPEPHEDLFRRSLTGKSQKFLRSHLTLPPSSCRSYAYLLSSYWANDDKVRNALHVRKGTIKKWERCNFGDLEYEIPSSFEYHLNLSKKGYRSLIYSGDHDPGVPFMATQAWIRALNYSIVDDWRPWIVRGQVAGYTRTYSNKMTFATVKGAGHLAPEYKPEESFAMFTRWISNTPLMSFGNFGVLNLLSLGFFVIKSYSHSWTEDIVNNGSCFWDESFIEVRKWTTNFNPDSALKDATTALWVEAHHLPRASVSYPAHGVLPPTPV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1756 518 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 412 IPR001563 GO:0004185|GO:0006508
Glsi07g1756 518 Pfam Serine carboxypeptidase 37 425 IPR001563 GO:0004185|GO:0006508
Glsi07g1756 518 Gene3D alpha/beta hydrolase 39 432 IPR029058 -
Glsi07g1756 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Glsi07g1756 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Glsi07g1756 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 395 408 IPR001563 GO:0004185|GO:0006508
Glsi07g1756 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Glsi07g1756 518 SUPERFAMILY alpha/beta-Hydrolases 35 428 IPR029058 -
Glsi07g1756 518 FunFam Carboxypeptidase 283 427 - -
Glsi07g1756 518 FunFam Carboxypeptidase 331 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1756 Glsi-ChrGlsi07 58645910 58658728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1756 25 56 Calmodulin-binding Proteins AT2G22960 53.125 7.92e-06 45.1