Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1732 ATGAGCTGCTTTCAATGTTTTTCATCCCAAGAAAAGAAAACTCCAAAGAAGCCCAACAACGGAAGGAGAACACAATCGCCTGCATCTCCAACTCCCATTGAAGCAGCCCTACCTGAGCCATGGCATGAGAATCATAATGCAAAGCCAAAGGCCACCCCACCAGCAGAACCTATAATAAATGACGATGCCAACAAGGACACTGGCAACAATAACATTGCAGCACATACTTTCACCTTCCGGGATTTGGCAGTAGCAACAAAGAACTTCCGGCAGGAAACCCTAATAGGTGAAGGTGGATTTGGAAGAGTTTACAAAGGAAGATTTGAAAAAACCAGCCAGGATGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGAAATAAAGAGTTTCTTGTTGAGGTGTTGATGCTGAGCCTCTTACACCATGAAAATCTAGTGAATCTAATTGGGTATTGTGCTGATGGAGATCAGAGACTATTGGTATATGAGTACATGCCATTAGGATCTCTAGAGGACCATCTACTTGATCTTCCTACAGAGAAAGGGCCACTAGATTGGATTACCAGAATGAAAATAGCACTGGGAGCAGCCAAAGGTCTTGAATATTTGCATGATAAGGCTAATCCCCCTGTAATCTACAGGGACTTGAAATCTGCCAACATCTTACTTGACGAGGATTTTAATGCAAAGCTATCTGATTTTGGACTAGCCAAGCTCGGACCTATGGGGGACAAGTCTCATGTCTCTTCAAGAGTAATGGGAACTTATGGCTACTGTGCTCCTGAGTATCAAAGAACTGGTCAACTCACTGTAAAATCAGATGTTTACAGCTTTGGAGTTGTTTTGCTTGAACTGATCACTGGAAAGAGAGCCATTGACAACACAAGAGAAACCCGGGAGCAAAACCTTGTTTCTTGGGCACATCCAATATTCAAGGACCCTCATAGATATCCAGAATTAGCTGATCCCCTTCTTGAAGGAAACATTCCAGCAAGAGCATTGAACCAAGCTGTGGCAGTGGCAGCCATGTGCCTCAATGAGGAAGCATCGGCAAGGCCCCTGATGAGCGACGTAGTCACTGCTCTTAGTTTTCTTGGGACAGATAAAGACCCTCCAGGTATTACGCCCAGTGACATACCCTCCCCACCACCTGGGCAACAAGAAACTGCAGAGTATTTGAATCTTCTTGATGATGATACTGCTTTTGAACGCCAACGAGCTGATGCCGAGGCCATTAATGAATGGGGTTCAACTACTTAA 1263 0.445 MSCFQCFSSQEKKTPKKPNNGRRTQSPASPTPIEAALPEPWHENHNAKPKATPPAEPIINDDANKDTGNNNIAAHTFTFRDLAVATKNFRQETLIGEGGFGRVYKGRFEKTSQDVAVKQLDRNGLQGNKEFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPTEKGPLDWITRMKIALGAAKGLEYLHDKANPPVIYRDLKSANILLDEDFNAKLSDFGLAKLGPMGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGKRAIDNTRETREQNLVSWAHPIFKDPHRYPELADPLLEGNIPARALNQAVAVAAMCLNEEASARPLMSDVVTALSFLGTDKDPPGITPSDIPSPPPGQQETAEYLNLLDDDTAFERQRADAEAINEWGSTT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1732 420 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Glsi07g1732 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Glsi07g1732 420 PANTHER OS07G0668900 PROTEIN 3 370 - -
Glsi07g1732 420 FunFam Serine/threonine-protein kinase PBS1 166 378 - -
Glsi07g1732 420 MobiDBLite consensus disorder prediction 368 389 - -
Glsi07g1732 420 MobiDBLite consensus disorder prediction 1 31 - -
Glsi07g1732 420 CDD STKc_IRAK 95 363 - -
Glsi07g1732 420 FunFam Serine/threonine-protein kinase PBS1 62 165 - -
Glsi07g1732 420 Gene3D Phosphorylase Kinase; domain 1 59 165 - -
Glsi07g1732 420 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1732 420 MobiDBLite consensus disorder prediction 1 67 - -
Glsi07g1732 420 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1732 420 Gene3D Transferase(Phosphotransferase) domain 1 166 371 - -
Glsi07g1732 420 Pfam Protein kinase domain 90 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1732 420 SUPERFAMILY Protein kinase-like (PK-like) 75 385 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1732 Glsi-ChrGlsi07 57737786 57741005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1732 1 417 Glycoside Hydrolase AT3G07070 67.943 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Glsi07g1732 Pkinase 2.1e-48 CL0016