Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1730 ATGTGGGGATATTGTGCCGAGGGTAAGCACAGGCTACTGGTTTATGAGTACATGGAGAATGGTTCTTTGGCAGAAAATCTCATGTCAAATACTCTTGATTGGAGCAAGAGATATAACATAGCTCTTGGAACAGCAAGAGTTCTAGCATACCTCCATGAAGAATGCTTGGAATGGATTTTACACTGCGACATAAAACCCCAAAACATTCTTCTGAACTCTACCTACCAACCCAAAGTAGCAGACTTTGGCTTGTCTAAGCTGCTAAACAGAAATGACCTCAACACTGCAAGCTTCTCAACGATAAGAGGAACCAGAGGTTATATGGCACCAGAGTGGGTTTTCAACTTGCCAATAACCTCCAAGGTGGATGTCTACAGCTATGGAATTGTGGTCTTGGAGATGCTAACAGGGAGGCGCCAAACAACGGGAATTCAAACAGTTGATGGAGTAGAGACAAATAATAGGAGGTTAGTTGCTTGGGTGAGAGAGAAAAGAAGCAAAGCAGCAGCTGAAATGTCATCTTGGGTGGAGCAAACAATTGATCCCGCAATTGAACCACAGTCTGAGTTCGAGGTGCGTAAGATGGAAACTTTGGCTAGAGTGGCTTTGGACTGTGTTGAGGAAGACAAAGATGCAAGGCCGACTATGAGCCAAGTTGTTGAGATGCTTCAAAGCCATGAAAAATGA 687 0.4396 MWGYCAEGKHRLLVYEYMENGSLAENLMSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLNSTYQPKVADFGLSKLLNRNDLNTASFSTIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMLTGRRQTTGIQTVDGVETNNRRLVAWVREKRSKAAAEMSSWVEQTIDPAIEPQSEFEVRKMETLARVALDCVEEDKDARPTMSQVVEMLQSHEK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1730 228 Gene3D Transferase(Phosphotransferase) domain 1 18 228 - -
Glsi07g1730 228 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1730 228 SUPERFAMILY Protein kinase-like (PK-like) 2 223 IPR011009 -
Glsi07g1730 228 PANTHER OS07G0415500 PROTEIN 1 225 - -
Glsi07g1730 228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 59 71 IPR008271 GO:0004672|GO:0006468
Glsi07g1730 228 Pfam Protein kinase domain 2 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1730 228 SMART serkin_6 1 223 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1730 228 PIRSF ILK 1 228 - -
Glsi07g1730 228 FunFam Serine/threonine-protein kinase 18 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1730 Glsi-ChrGlsi07 57503087 57503773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1730 1 223 Receptor kinase-like Gene Family AT5G65700 40.265 3.22e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi07g1730 Pkinase 3.7e-39 CL0016