Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1726 ATGATGGAGAAGATCAAGAGGGAAATTTTCATCATGAAGATTGTGAAGCACCCTAACATCGTTAAGCTCTATGAAGTGATAGCTAGCAAATCAAAGATCTATATTGCCATGGAGCTTGTTCAAGGTGGCAAGTTGTTCAATGGGTTGTTGCGTACAACTTGTGGAACTCTAATGTATGTGGCATTGAAGGTAATTGGGAAGAAAGGCTATCATGGTGCCAAGGCTAATCTTTGGTCTTTTAGGGTCATCCTTTATGTTCTTTTTACCGAGTTCTCACCTTTTGATGATGACAATTTGGTGTCTATGTATAGGAAAATCTATAGGAAAGACTTCAAATGGCTACCTTGGTTCTCCTCCAAAGTTCTTCGACTTCTCATAAAGTTTCTTGACCTAAACTTAAATACCCAAATCATGATTTGCAATTCATACACTCGTCTTGGTTCAAGAAATCAAATCCCAAGAGCATGA 468 0.3825 MMEKIKREIFIMKIVKHPNIVKLYEVIASKSKIYIAMELVQGGKLFNGLLRTTCGTLMYVALKVIGKKGYHGAKANLWSFRVILYVLFTEFSPFDDDNLVSMYRKIYRKDFKWLPWFSSKVLRLLIKFLDLNLNTQIMICNSYTRLGSRNQIPRA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1726 155 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1726 155 SUPERFAMILY Protein kinase-like (PK-like) 2 136 IPR011009 -
Glsi07g1726 155 Gene3D Transferase(Phosphotransferase) domain 1 49 145 - -
Glsi07g1726 155 Gene3D Phosphorylase Kinase; domain 1 1 48 - -
Glsi07g1726 155 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 48 139 - -
Glsi07g1726 155 Pfam Protein kinase domain 3 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1726 155 SMART serkin_6 3 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1726 Glsi-ChrGlsi07 57282580 57283241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1726 1 46 CBL-interacting serine-threonine protein kinases AT4G30960 71.739 8.30e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi07g1726 Pkinase 1.9e-09 CL0016