Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1725 ATGAACCTGATCGAAATGTGGGGATATTGTGCTGAGGGTAAGCACAGGCTATTGGTTTATGAGTACATGGAGAATGGTTCTTTGGCAGAAAATCTCATGTCAAATACTCTTGATTGGAGCAAGAGATATAACGTAGCTCTTGGAACAGCAAGAGTTCTAGCATACCTCCATGAAGAATGCTTGGAATGGATTTTACACTGCGACATAAAGCCCCAAAACATTCTTCTGGACTCTACCTACCAACCCAAGGTAGCAGATTTTGGCTTGTCTAAGCTACTAAACAGAAATGACCTCAACACTCCAAGCTTCTCAATGATAAGAGGAACCAGAGGTTATATGGCACCAGAGTGGGTTTTCAACTTGCCAATAACATCCAAGGTGGATGTCTACAGCTATGGAATTGTTGTCTTGGAGATGCTAACAGGAAGGCGCCTAACAACGGGAATTCAAACAGTTGATGGAGTAGAGACAAATAATGGGAGGTTAGTAACTTGGGTGAGAGAGAAAAGAAGCAAAGCAGCAACTGAAATGTCATATTGGGTGGAGCAAATAATTGATCCCGCAATTGAACCACAGTCTGAGTTCGAGGTGCGTAAGATGGAAACTTTGGCTAGAGTGGCTTTGGACTGTGTTGAGGAAGACAAAGATGCAAGGCCCACTATGAGCCGAGTTGCTGAGATTCTTCAAAGGCATGGAAATGATTTTTCTTAG 711 0.429 MNLIEMWGYCAEGKHRLLVYEYMENGSLAENLMSNTLDWSKRYNVALGTARVLAYLHEECLEWILHCDIKPQNILLDSTYQPKVADFGLSKLLNRNDLNTPSFSMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMLTGRRLTTGIQTVDGVETNNGRLVTWVREKRSKAATEMSYWVEQIIDPAIEPQSEFEVRKMETLARVALDCVEEDKDARPTMSRVAEILQRHGNDFS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1725 236 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Glsi07g1725 236 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1725 236 Gene3D Phosphorylase Kinase; domain 1 1 23 - -
Glsi07g1725 236 SMART serkin_6 2 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1725 236 Gene3D Transferase(Phosphotransferase) domain 1 24 235 - -
Glsi07g1725 236 PIRSF ILK 1 236 - -
Glsi07g1725 236 Pfam Protein kinase domain 2 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1725 236 SUPERFAMILY Protein kinase-like (PK-like) 2 229 IPR011009 -
Glsi07g1725 236 FunFam Putative receptor-like protein kinase 23 234 - -
Glsi07g1725 236 PANTHER OS07G0415500 PROTEIN 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1725 Glsi-ChrGlsi07 57153136 57153846 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1725 2 229 Receptor kinase-like Gene Family AT5G45780 37.179 3.14e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi07g1725 Pkinase 1.1e-39 CL0016