Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1682 ATGCCAGACGAAAAGATATCCACGATGTTGTTTCCCATCGACATGAGGAAAAGGGTTGTTCCAGAACTTCAAGATGGCTTCGCAGGCAACGCATTGGTTCCTGGCTATGCACGAGCAACGGTGAGGGAGCTCATGGAATTAGAAGATGCTTACCACGTAAGGAAAGTTCAAGAGGGAATTGAAAGGTTGGATGAGGAGTATGTGAGGTCAGGGATAGATTGGTTAGAGGTGAACAGAGGGGTGCCTTGCAGGGAAGATAGTTTTTCCCTAGTGGCATGGTGGAGATTAGGGCTAGAGGAGCAACTTTTTGCATGGGGAAGACTAAAATGTGCCACTCCACTTGCAGTTAAGCCAGGCCTTGTCATGCTATTGCCAGGATCAGAAGGCGAGGGAGGCCTTAGTATTTGCCTGGACTTACCTGATGATCAAATGCAAGAGTTTTGCAAGATAATGCTGGAACAAGTTAAGCTTTCAGTTTTACCTCATCTTTTGGGGTTCTTTTTCTTTGGTGGTGCAAATGTTCTGAGTTTGGCAACACGAGGAAGAAATGCTCGTTTTCTGCGTTAG 567 0.4621 MPDEKISTMLFPIDMRKRVVPELQDGFAGNALVPGYARATVRELMELEDAYHVRKVQEGIERLDEEYVRSGIDWLEVNRGVPCREDSFSLVAWWRLGLEEQLFAWGRLKCATPLAVKPGLVMLLPGSEGEGGLSICLDLPDDQMQEFCKIMLEQVKLSVLPHLLGFFFFGGANVLSLATRGRNARFLR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1682 188 Gene3D - 1 152 IPR023213 -
Glsi07g1682 188 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 147 - -
Glsi07g1682 188 Pfam Transferase family 3 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1682 Glsi-ChrGlsi07 55654290 55655948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1682 1 153 Monolignol Biosynthesis Gene Families AT5G48930 25.926 1.10e-15 72.4