Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1666 ATGAGTACTCGTGTGGTCACAGGATCAGCTGTCAGAAGTTATCGGAGGAGGAAGACAGTTTTGGACTTAGACCTTAACTGTTTCCCACCCAGTGAGAATTGGGAACAGGAGGGACCTTCGACTCAATTGGAGCCTCAAGAAGTTCAAGCTGGCCAACAACTGCAGGTTGTACAACCTGCGATGATTGATGTGGAGGCCATTGATGATGATGTTGTTGAATCCACTCCTAGGGCTTTTGCTGAGGCTAAAAACAATTTGAGAAGAAATAGGAGGAGAACTATAGTTGATGTGGATTTAGAAGATTGGACTAGATTAACCAATAATAATCACAACAAACGCAGAAGAGGTTCTCAAAATCAAACAATTATTAACTGTGATCTTTATATCAACTTGGAAGGCAGTAGCAGTTCTGTGAGGGAAAACGTAAGAAAGCCACCTGAACCTCCAAAGGATCCTGTCTTTAACTGTCCAATATGTATGGGCACTTTAGTAGAAGAAACGTCAACAAGGTGTGGTCATATTTTTTGCAAGAATTGCATTAAGGCTGCAATAAATGTACAAGCTAAATGCCCCACCTGCAGAAAAAAGGTTACTATGAAAGAGCTTATAAGGGTGTTTCTCCCATCAACTAGTTGA 636 0.4119 MSTRVVTGSAVRSYRRRKTVLDLDLNCFPPSENWEQEGPSTQLEPQEVQAGQQLQVVQPAMIDVEAIDDDVVESTPRAFAEAKNNLRRNRRRTIVDVDLEDWTRLTNNNHNKRRRGSQNQTIINCDLYINLEGSSSSVRENVRKPPEPPKDPVFNCPICMGTLVEETSTRCGHIFCKNCIKAAINVQAKCPTCRKKVTMKELIRVFLPSTS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1666 211 PANTHER ELFLESS, ISOFORM B 6 211 - -
Glsi07g1666 211 ProSiteProfiles Zinc finger RING-type profile. 156 194 IPR001841 -
Glsi07g1666 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 209 IPR013083 -
Glsi07g1666 211 SUPERFAMILY RING/U-box 155 200 - -
Glsi07g1666 211 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Glsi07g1666 211 SMART ring_2 156 193 IPR001841 -
Glsi07g1666 211 Pfam Zinc finger, C3HC4 type (RING finger) 155 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1666 Glsi-ChrGlsi07 55064588 55073464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1666 12 210 C3H Transcription Factor Family AT5G48655 50.249 1.28e-49 159