Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1644 ATGGAAAGATATAAAATTTTGAGAGAGCTTGGAGATGGTTCTTGCGGTCATGTATATAAGGCCCGTGATTTGAGAACATATGAGATTGTTGCTGTCAAAAAGTTGAAAAGAAAGTTCTATTTTTGGGAATACACAAATTTAAGAGAAGTTAAGGTCCTCCGTAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTTGTCAGGGAAAATAATGAACTGTTTTTCATATTTGAATACATGGATTATAATCTTTATCAATTAATAAAAGAAAGACAAAAGCCCTTTTCAGAGGAAGAGATACGGTCCTTTATGAAGCAAGTGCTGCTTGGACTTAGTCATATGCACAAGAAAAGATTCTTTCATCGGGATTTAAAACCTGAGAATTTGCTGGTGACAAATGATCTTCTTAAAATTGCTGATTTTGGGCTCGCTAGAGAAGTATCATCAATGCCTCCTTATACTCAATATGTTTCCACACGGTGGTACCGAGCTCCAGAAGTTTTATTGCAATCTCCATGTTATACTCCTGCTGTTGACATGTGGGCAGCTGGTGCTATATTAGCTGAGCTTTTTACCTTGACCCCCATATTCCCTGGTGAAAGTGAAATAGATCAGCTGTACAAGATATACTGTGTTCTCGGCACACCGGATTTGACTGCTTTCCCTGTTGGGGCAAACAACTCTAGGTTATTAGACCTGGTTGGTCATGAAGTGGTTCCACCTGCAAAGCTTTCTGATATAATTCCAAATGCTAGCTTGGAAGCTATAGATTTGATCACGCAACTTTTATCATGGGATCCATCAAGAAGGCCTGATGCAGATCAGTCATTGCAACATCCTTTTTTCCATGTGGGTACGTGGGTTCCTTGTCCACTCCACGATCCTCTTGAGTTGAAGCTGAGTAGCAAGAGGGCAAAGCCAAATCTTGAGCTGAAACTGCAGGATTTTGGCCCTGATCCCGATGACTGTTTTCTTGGCTTGACATTAGCTGTAAAGCCGAGTGTTTCAAACTTGGATGTGGTTCACAATGTATCACAGGGTATGGAAGAGAATGTGTTCTTTTGCTCGGATTTCAATGATCATTCAGACCAGTCAGTGTTTTGGACATTGTTATCTCCTGACCAAAATGGAGTCCACTCCTCAGCAGAGACTTCTTTGTCATTGTCATTTGGTTCAATTCAACATCCACCAATTGGAGTTCCACAGTCAGCAGGATTCTCCTTTCAGCCTTTGCAGCCTAACCTCTTAACTGCGCCATTTTTGGCTCTGTCTTCCCCCTTCCAGCGTGGGCACTGCCTTTAG 1305 0.4123 MERYKILRELGDGSCGHVYKARDLRTYEIVAVKKLKRKFYFWEYTNLREVKVLRKMNHPNIIKLKEVVRENNELFFIFEYMDYNLYQLIKERQKPFSEEEIRSFMKQVLLGLSHMHKKRFFHRDLKPENLLVTNDLLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAAGAILAELFTLTPIFPGESEIDQLYKIYCVLGTPDLTAFPVGANNSRLLDLVGHEVVPPAKLSDIIPNASLEAIDLITQLLSWDPSRRPDADQSLQHPFFHVGTWVPCPLHDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSVSNLDVVHNVSQGMEENVFFCSDFNDHSDQSVFWTLLSPDQNGVHSSAETSLSLSFGSIQHPPIGVPQSAGFSFQPLQPNLLTAPFLALSSPFQRGHCL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1644 434 FunFam Probable serine/threonine-protein kinase DDB_G0268078 82 290 - -
Glsi07g1644 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Glsi07g1644 434 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 311 - -
Glsi07g1644 434 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1644 434 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1644 434 FunFam Serine/threonine-protein kinase MHK 1 82 - -
Glsi07g1644 434 SUPERFAMILY Protein kinase-like (PK-like) 1 284 IPR011009 -
Glsi07g1644 434 CDD STKc_MAK_like 4 283 - -
Glsi07g1644 434 Gene3D Phosphorylase Kinase; domain 1 4 80 - -
Glsi07g1644 434 Gene3D Transferase(Phosphotransferase) domain 1 81 283 - -
Glsi07g1644 434 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1644 Glsi-ChrGlsi07 53947311 53958418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1644 2 299 Core Cell Cycle Gene Families AT1G73690 39.404 1.28e-63 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Glsi07g1644 Pkinase 2.6e-74 CL0016