Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1638 ATGATCTCTACTTCCTTGTTGGATCTTCTCTTTTACAGCTCACATTCCAAATCGGGAAAGGCATCATTACTTCAAGAGTCTCTGGTAGCTAGTGCAGCAATACCTGGCATCAAGTTCACTGAAGCACAGATCAAATGTTATATGCAACAGCTGCTTCGTGGTATTGAGCATTGCCACAGCCATGATGTTCTGCACCGACACGTCAAGGGTTCAAATCTTCTGATTGACAGGAATGGTAATCTAAAGATGGGTGATTTTGGACTAGCAACTTTGTTTCAGCTGTCTGAGAGGCAGATTTTAACAAGTCGAGTGGTAATCTTGTGGTACCGACTACCTGAACTTCTACTGGGATCTTCAGATTATGGAGTTGCTGTGGACCTGTGGAGTGCTGGTTGCATTCTGGCAGAAGTGTTTGCTGGAAAGCCAATAATGCCGATTTTCATTTGGAATTCTACATTTTATTGGCCATACTGA 474 0.4304 MISTSLLDLLFYSSHSKSGKASLLQESLVASAAIPGIKFTEAQIKCYMQQLLRGIEHCHSHDVLHRHVKGSNLLIDRNGNLKMGDFGLATLFQLSERQILTSRVVILWYRLPELLLGSSDYGVAVDLWSAGCILAEVFAGKPIMPIFIWNSTFYWPY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1638 157 Gene3D Transferase(Phosphotransferase) domain 1 37 145 - -
Glsi07g1638 157 SUPERFAMILY Protein kinase-like (PK-like) 36 145 IPR011009 -
Glsi07g1638 157 PANTHER CELL DIVISION PROTEIN KINASE 32 145 - -
Glsi07g1638 157 SMART serkin_6 4 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1638 157 FunFam Mitogen-activated protein kinase 34 152 - -
Glsi07g1638 157 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1638 157 Pfam Protein kinase domain 36 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1638 Glsi-ChrGlsi07 53636128 53638342 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1638 24 145 Core Cell Cycle Gene Families AT5G10270 55.738 6.49e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi07g1638 Pkinase 5.7e-34 CL0016