Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1630 ATGTCCAGCAGTGCCCGCCAAAGAGGACTGGAATTTAGGGATCGGGTACTGTTTCCTTTACTTCCATTACCGGATTGGCCTTACCTTCGTCTCTTGCCATCAATGTCTTCCTTCATGATTTCTTCATTATCGAATCCCCAATCTTCGTCCTCAGAACCGAAATGGAAATACGACGTATTCTTCAGTTTTATGCTCAGAAGTGATTTCACATCTTTTCTCAAATCTTCTCTAAAAGTTGCTGAAATCAAAATATCCACCGACTCCTACTATGACCGCAAAGAGATCCCGCCTTCACTATTAAGTGCCATCGAAGGGTCTAGAATCTCAATAATCGTTTTCACAAGAGATTACGGTGGCTCCATAAGGCGTCTGCAGACACTGGAGAAAATCATGGAGTGCCATAGAAGTATGGGTCAGGTGGTGTTGCCTGTTTTTTATGATGTAAATCTGTGGGAAGTACGGAAGCAGAGTGGCATATTTGGAGAAGCATTTGACGGACTCATAGGGGAGAAGTGCATGACGAAAGATCAGGAATTGAGATGGAGAAGAGAGCTCGCTGAAGTTACATTGCTGCCGGGTTGGGATGTGCAATCTTCCAGTATTGGAATAGTCATACATATGGTTGATTCTATCAAGAGAATTCTAGACAATTCATCCTTGTTCATCACGCGCCATCCAGTGGGGGTCGAACGTCGTGTGGCCGAAGTGCTTCAATTGTGTAAATTTCGCGAAACAGTGAGAATCGTAGGGATATGGGGAGTGGAGGGAATTGGTAAATCAACTATTGCCAAAGCCATTTACAATGAAATCAGGTGCAGGTTTGAGAGGAGAAGTTTTCTTGCAAATATAAAGGATGTATGGGAGAAAGATAATGGTCAAGTTTACTTACAAGAACAACTTATTTCAAATATCAGTAATGCAATTGATGTGCAGATACATGACATTGAAATGGGAATTAGACAAATGAAGATGTTACTACACAATAAAAAGGTACTTGTAGTACTTGACGATGTGAGTAAGATAGACCAACTGATGGCCTTGTGTGGAAGTCGTGAGTGGTTTGGTGTAAGGAGTGTTGTATTCATCACCACAAGAGATTTGCATCTACTTGATCACCTTAAAGTGGACTTTGTGTATAAAATGAAAAATATGGACAAAAGTGAATGTCTTGAGCTTTTTAGTTGGCATGCATTTAAGTACTCTAGTCCGCTCAATGATTTCTCTGATCTCTCACGAAAAGCAATTGCTTATTGTGGAGGACTACCATTGGCTCTTGAAGTCCTTGGATCTCTTTTGCTTGATAAAACAAGACCTGAGTGGGAAATTTTATTCAAGAAACTTCCAAGATCTACCTCAAGTGCAGTACCAAATGTGCTTAAGCTAAGCTATGAATATTTAGAAAATTCGGAGAAAGACATATTCCATGACATAGCTTGCTTTTATGTGGGTAAAGACAGACAGTATGTTACAGAAATATTGACTGATTGTGGGTATTGTGCAGAAGTCACAATAAGTGTGCTTATTGCGCGGAGCCTTGTAAAAGTTGACAAGAATAACAAGCTTGAAATGCACGGTTATTTTCGAGAGATGGGAAGCGAAACCAATCCTTATAAAACAAAACCCAAATATATCTATGATGTATTCTTGAGTTTTAGGGGTGAAGAAACTCGCAAGGCTTTTGCTAGTCATCTTTGTGCTACTTTGAGAAATGCTGGCATTGAGGTTTTCATGGATGACAGGCTCAAACGGGGAGAAAACATCTCATCCTCACTATTGCAAGGAATTGAAGGTTCTAGAATTTCAATAATTCTTTTCTCAGCAGATTACGCTGGTTCTAGATGGTGCTTGCAGGAATTGGAGAAAATCATGGAGTGTCGAAGGACTACTGGCCAAGAGGTTCTACCTATATTCTATGGTGTGCAACCATCAGACGTACGTAGACAAATGGGGACTTTTGGAAAAGCATTAGAAAAACTTAGTAGGAGAATCTCAGCTAGCAAAGAGAAGATAGTGAGTTGGAGGAGAGCGCTCACTGAAGCTGCCAATATATCTGGGTGGGACTTGCACAATTATAGAACTGAAATAGGTTTAATCAATCATATTCTTGAAAGTGTTACCATGAAACTAGATGACAACACATACTTGTTCGTCCCTGACCACCCAGTGGGAGTGAAGTCTCGTGCACAGGAGATTATTAAATTGTTAAGTGGTAAATCAAATGAGATTATCATAGTAGGGATTTGGGGAATGGCAGGAATTGGTAAAACAACTATTGCCACAGTTATTTACAATGAAATTGGGAGAAAATTTGAGAGTAAAAGTTTCCTTGCAAATATCAGGGAACTTTGGGAGCAGGATAAGGGCCAAGTTGATTTGCAAGAACAGCTTCTTTCAGGAATCTTGAAAGGAAGAAAAAGGATACATAACATTGGATTTGGAAAAACTATAATGAAGGAAAGACTTAGTCATACTAGAGCACTAGTTGTACTTGACAATGTGGATAAGTTGGACCAACTTAGTTCTCTGTGTGGAAGTCGTGAATGGTTTGGTCGAGGGAGCAGAATAATCATTACCACTAGAGATGAGCATCTTTTGAATGTCCTTCAAGTGGATAATGTATACAATATGAAAGAATTGGACGATTATGAATCTCTTGAACTTTTCAGTTGGCATGCATTTAAGCAAGCAACACCTAGAGAAGATTTTGTTGAACTTTCAAGGAGGGTAATTGCTTACTCTGGAGGACTACCACTAGCTCTTGAAGTCCTTGGCTCTTATTTGTTTGATAGGACAATATTAGCTTGGGAAAGTGTTTTGCAAAAACTACAAGAAATTCCCAATGATCGAATACATGAAAAGCTGAAAATAAGCTATGATGGTTTGAGCGATCATATGGAGAAAGACATATTCCTTGACATATGTTGTTTTTTTATTGGTAAAGACAGAAATTATGTTACACAAATATTAAATGGCTGTGGCCTTCATGCAGAAATTGGAATTACACGTTTGATAGAGCGCAGCCTTGTAAAAGTTAACAAGAATAACAAGTTTGAGATGCATGATTTACTATGA 3072 0.3913 MSSSARQRGLEFRDRVLFPLLPLPDWPYLRLLPSMSSFMISSLSNPQSSSSEPKWKYDVFFSFMLRSDFTSFLKSSLKVAEIKISTDSYYDRKEIPPSLLSAIEGSRISIIVFTRDYGGSIRRLQTLEKIMECHRSMGQVVLPVFYDVNLWEVRKQSGIFGEAFDGLIGEKCMTKDQELRWRRELAEVTLLPGWDVQSSSIGIVIHMVDSIKRILDNSSLFITRHPVGVERRVAEVLQLCKFRETVRIVGIWGVEGIGKSTIAKAIYNEIRCRFERRSFLANIKDVWEKDNGQVYLQEQLISNISNAIDVQIHDIEMGIRQMKMLLHNKKVLVVLDDVSKIDQLMALCGSREWFGVRSVVFITTRDLHLLDHLKVDFVYKMKNMDKSECLELFSWHAFKYSSPLNDFSDLSRKAIAYCGGLPLALEVLGSLLLDKTRPEWEILFKKLPRSTSSAVPNVLKLSYEYLENSEKDIFHDIACFYVGKDRQYVTEILTDCGYCAEVTISVLIARSLVKVDKNNKLEMHGYFREMGSETNPYKTKPKYIYDVFLSFRGEETRKAFASHLCATLRNAGIEVFMDDRLKRGENISSSLLQGIEGSRISIILFSADYAGSRWCLQELEKIMECRRTTGQEVLPIFYGVQPSDVRRQMGTFGKALEKLSRRISASKEKIVSWRRALTEAANISGWDLHNYRTEIGLINHILESVTMKLDDNTYLFVPDHPVGVKSRAQEIIKLLSGKSNEIIIVGIWGMAGIGKTTIATVIYNEIGRKFESKSFLANIRELWEQDKGQVDLQEQLLSGILKGRKRIHNIGFGKTIMKERLSHTRALVVLDNVDKLDQLSSLCGSREWFGRGSRIIITTRDEHLLNVLQVDNVYNMKELDDYESLELFSWHAFKQATPREDFVELSRRVIAYSGGLPLALEVLGSYLFDRTILAWESVLQKLQEIPNDRIHEKLKISYDGLSDHMEKDIFLDICCFFIGKDRNYVTQILNGCGLHAEIGITRLIERSLVKVNKNNKFEMHDLL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1630 1023 ProSiteProfiles TIR domain profile. 55 212 IPR000157 GO:0007165
Glsi07g1630 1023 SUPERFAMILY Toll/Interleukin receptor TIR domain 48 191 IPR035897 -
Glsi07g1630 1023 Coils Coil 656 676 - -
Glsi07g1630 1023 PRINTS Disease resistance protein signature 325 339 - -
Glsi07g1630 1023 PRINTS Disease resistance protein signature 418 432 - -
Glsi07g1630 1023 PRINTS Disease resistance protein signature 248 263 - -
Glsi07g1630 1023 Pfam NB-ARC domain 244 460 IPR002182 GO:0043531
Glsi07g1630 1023 Pfam NB-ARC domain 728 955 IPR002182 GO:0043531
Glsi07g1630 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 477 IPR027417 -
Glsi07g1630 1023 Gene3D - 878 962 IPR042197 -
Glsi07g1630 1023 Gene3D - 383 467 IPR042197 -
Glsi07g1630 1023 FunFam Disease resistance protein (TIR-NBS-LRR class) 541 711 - -
Glsi07g1630 1023 SMART till_3 56 191 IPR000157 GO:0007165
Glsi07g1630 1023 SMART till_3 544 683 IPR000157 GO:0007165
Glsi07g1630 1023 SMART AAA_5 741 883 IPR003593 GO:0016887
Glsi07g1630 1023 SMART AAA_5 245 385 IPR003593 GO:0016887
Glsi07g1630 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 973 IPR027417 -
Glsi07g1630 1023 Gene3D - 49 215 IPR035897 -
Glsi07g1630 1023 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 545 1023 IPR044974 GO:0006952
Glsi07g1630 1023 Pfam TIR domain 545 708 IPR000157 GO:0007165
Glsi07g1630 1023 Pfam TIR domain 56 200 IPR000157 GO:0007165
Glsi07g1630 1023 Gene3D - 539 711 IPR035897 -
Glsi07g1630 1023 SUPERFAMILY Toll/Interleukin receptor TIR domain 541 686 IPR035897 -
Glsi07g1630 1023 SUPERFAMILY "Winged helix" DNA-binding domain 455 533 IPR036390 -
Glsi07g1630 1023 Gene3D - 712 873 IPR027417 -
Glsi07g1630 1023 Gene3D - 216 378 IPR027417 -
Glsi07g1630 1023 ProSiteProfiles TIR domain profile. 543 709 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1630 Glsi-ChrGlsi07 53261720 53279476 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1630 246 533 WRKY Transcription Factor Family AT5G45050 33.562 9.34e-45 174