Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1627 ATGAGTTTCGTTCATTCGACGAAGGCAGCTCCTATTTTTCTCGTCTTCCTTCTTATCTCGACCCTAGTTTCTGCAAAGAAGTCCAGTGATGTAACAGATTTACAGATAGGTGTGAAGCATAGACCAGAATCATGTGAAATTCAGGCACATAAAGGTGATAGAGTCAAAGTGCACTATCGGGGAAAACTTACTGATGGAACTGTTTTTGATTCTAGCTTTGAGAGAAATAACCCAATCGAATTTGAGCTTGGTACTGGTCAAGTGATCAAAGGGTGGGACCAAGGAGTATTAGGAATGTGTCTAGGTGAGAAGAGAAAGTTAAAAATACCAGCAAAACTTGGCTATGGAGAGCAGGGTTCCCCTCCTACTATTCCAGGTGGTGCAACACTCATATTTGACACTGAACTCGTAGGAGTGAATGGGAAAACTTTAAGTGAAGAAAAGCCGAAGTCCGAGCTTTAG 462 0.4199 MSFVHSTKAAPIFLVFLLISTLVSAKKSSDVTDLQIGVKHRPESCEIQAHKGDRVKVHYRGKLTDGTVFDSSFERNNPIEFELGTGQVIKGWDQGVLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNGKTLSEEKPKSEL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1627 153 SUPERFAMILY FKBP-like 33 144 - -
Glsi07g1627 153 FunFam Peptidylprolyl isomerase 20 140 - -
Glsi07g1627 153 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 46 137 IPR001179 GO:0003755
Glsi07g1627 153 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 140 IPR001179 GO:0003755
Glsi07g1627 153 PANTHER PEPTIDYLPROLYL ISOMERASE 13 142 IPR044609 GO:0000413|GO:0003755|GO:0061077
Glsi07g1627 153 Gene3D - 20 140 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1627 Glsi-ChrGlsi07 53196589 53203831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1627 53 146 Calmodulin-binding Proteins AT3G25230 35.354 8.27e-07 45.4