Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1611 ATGAGGGCAAAAGAATCTGGGGTCTATTTTGATCACGTTTCTAGCAGCTTAACAACCGTGCACGTGTCACGAAATCAGACGTTAAGTTCACCTTCACCGCGTACGGCATACCCCATCGTTCCCTATAAATTCTCTCTGAAGAGCAAAACACAGCCTAAAGCCGACGCCGTGCCGACCGGAAATCTTCAGGTTCTCTTCAAGTTGCGGTTCATCTCGGCCATGAACGACGACAACGACAATCACCTCACCTGCCACCGCACTTTGCCGGCCCTAGATTTTCAGAACCTCAAGGTGATCTCCGCCGTGGGCCGCGGAGCCAAGGGCGTTGTGTTCGTAGCCAAAAATGATGACGCTTCTGGCGATTATTTCGCTCTGAAAGTTATCTCCAAAGCTTTTTTGATTCAGAAGAAGGGGAAAGCACTGAACAATGATGGCGGCGAGTGCAAGAGAGTTTCGTTTGAACAACAGGTGCTGCGTCGTTTCGATCACCCGTTCTTGCCCAGATTGCGAGGGGTTCTGGAAACCGAGAAAATCATTGGGTACGCCATTGATTATTGCCCTGGAGGTAATCTCCATTCTCTCCGGAAGAAACAGACCGAGAAGATGTTCTCCGATGATAGCATAAGGTTTTATGCTGTGGAATTGGTCCTCGCATTGGAGTATTTGCACAACTTGGGAATAGTTTACAGGGATTTGAAGCCAGAAAACATAATGATTCAAGAAAGCGGTCACATAATGCTTGTCGATTTCGATCTCTCCAAGAAGCTAAACCCCAAGTCTCCACAATCGATGAGTTGCAACTCGTCGCCGAGTTGCCACTCGGTGAAGGCGGCGGCAGTGAAGGACTTAAGGAAGCGACGGTTCTACCGGTTCTACAGTTGCTCCATGCCAAGCCTCTCGTCCTACGACTCGGCATCGCCACCCGAGTCCCAGTGGGCACGGAGGAGCGAGTCAGACTCAGTCGAAAAGTCCAACTCGTTCGTTGGGACGGAGGAGTACGTGGCACCCGAGGTTGTATCGGGAAAAGGCCACAATTTCCTGGTGGACTGGTGGTCACTCGGCGTCGTTTTGTACGAGATGCTCTATGGGGCGACGCCGTTTAAGGGGGAGAATAGAAAAGAAACGTTTTATCGGATTTTGACGAAGTCGCCGGAACTGACGGGAGAAAAGACGGCGCTAAGGGATTTGATTGGGAAATTGCTGGAAAAGGACCCTGACCGTCGGATTGAAGTGGAGGAAATCAAGGGCCACGATTTCTTCAGAGGGGTTCAGTGGGATACGGTTTTGCAAGTTGCACGGCCGCCATATATTCCGCTGAATGAAGTCGAGGACAAAGAGGGATTTAAGAAAAATGATGTGGAGTTACTTGTCCATGAAATATTTTTTGGAGGGCAAGGGGATAGAGAAGATGAGCAAAAGAAGGGCGGAGAAGAGAACGGCGAGAATAAGAGAGATTGGGTAGATAAGTTAAGTCACAAGCCCGAGAATGAACATTTTTTGATTTTTTGA 1509 0.4924 MRAKESGVYFDHVSSSLTTVHVSRNQTLSSPSPRTAYPIVPYKFSLKSKTQPKADAVPTGNLQVLFKLRFISAMNDDNDNHLTCHRTLPALDFQNLKVISAVGRGAKGVVFVAKNDDASGDYFALKVISKAFLIQKKGKALNNDGGECKRVSFEQQVLRRFDHPFLPRLRGVLETEKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDSIRFYAVELVLALEYLHNLGIVYRDLKPENIMIQESGHIMLVDFDLSKKLNPKSPQSMSCNSSPSCHSVKAAAVKDLRKRRFYRFYSCSMPSLSSYDSASPPESQWARRSESDSVEKSNSFVGTEEYVAPEVVSGKGHNFLVDWWSLGVVLYEMLYGATPFKGENRKETFYRILTKSPELTGEKTALRDLIGKLLEKDPDRRIEVEEIKGHDFFRGVQWDTVLQVARPPYIPLNEVEDKEGFKKNDVELLVHEIFFGGQGDREDEQKKGGEENGENKRDWVDKLSHKPENEHFLIF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1611 502 Gene3D Phosphorylase Kinase; domain 1 96 189 - -
Glsi07g1611 502 Gene3D Phosphorylase Kinase; domain 1 440 449 - -
Glsi07g1611 502 PANTHER FLIPPASE KINASE 1-RELATED 83 446 - -
Glsi07g1611 502 SMART serkin_6 96 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1611 502 MobiDBLite consensus disorder prediction 466 495 - -
Glsi07g1611 502 FunFam Serine/threonine-protein kinase OXI1 322 439 - -
Glsi07g1611 502 Gene3D Transferase(Phosphotransferase) domain 1 320 439 - -
Glsi07g1611 502 ProSiteProfiles Protein kinase domain profile. 96 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1611 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Glsi07g1611 502 FunFam Serine/threonine-protein kinase OXI1 190 258 - -
Glsi07g1611 502 SUPERFAMILY Protein kinase-like (PK-like) 94 441 IPR011009 -
Glsi07g1611 502 Gene3D Transferase(Phosphotransferase) domain 1 190 266 - -
Glsi07g1611 502 Pfam Protein kinase domain 98 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1611 502 Pfam Protein kinase domain 322 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1611 Glsi-ChrGlsi07 52157348 52159481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1611 90 502 AGC Kinase Gene Family AT3G25250 57.611 3.31e-155 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi07g1611 Pkinase 1.3e-32 CL0016