Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1606 ATGGTTGAAGTAGTGAAGATGGGCATTAACCTGCAACTACAAAAGGTTAATTTTGAATCTGGCTGTAAAGATCTAATAGATGCTTGCAATGATCTAGAGTTAGGCTTTTGGGCCCTTGGTTCTCTTGGCCTCCATGGACGTGGCTATTCACCATATGTTGAGGTGGTTCCAGTTACGGCTGATCGTTACCTATTAATAGACAAAATGGATGTGCCTTTGCTAAGCAAAAAAATTGTAAAGAAGCGTGTCAAAAAGTTCAAGAGGCCTCAAAGTGACCGGAAAATTTCTGTTAAGACCAACTGGCGGAGGCCTAAGGGTATTGATTCCCGTGTGAGAAGAAAGTTTAAAGGATGTACATTGATGCCAAATATTGGTTATGGTTCAGACAAGAAGACTCGCCACTATCTCCCCAATGGATTCAAGAAATTTGTTGTGCACAATGTCCAGGAGCTGGAACTTCTGATGATGCACAACCGGACTTACTGTGCTGAGATAGCACACAATGTATCAACCCGGAAAAGGAAGGAAATTGTGGAGCGTGCTGCGCAGATGGATGTTGTTGTTACCAACAGACTGGCCAGATTGCGCAGTCAGGAGGACGAGTGA 606 0.4373 MVEVVKMGINLQLQKVNFESGCKDLIDACNDLELGFWALGSLGLHGRGYSPYVEVVPVTADRYLLIDKMDVPLLSKKIVKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQMDVVVTNRLARLRSQEDE 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1606 201 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 69 201 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi07g1606 201 CDD Ribosomal_L32_L32e 90 190 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi07g1606 201 Pfam Ribosomal protein L32 84 190 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi07g1606 201 SMART Ribosomal_L32e_2 83 190 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi07g1606 201 SUPERFAMILY Ribosomal protein L32e 65 199 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1606 Glsi-ChrGlsi07 52054814 52058587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1606 69 201 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 86.466 2.37e-84 244