Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1563 ATGAAGATGGTTCTGAGTAGCCGAATTTTCAGTGCTCATATTATTATTAATTTTTGGCTGCTGCTTAGTCGTAGCGTGACCTACGGGACTGAAACTGATATCTACTGCTTGAAAACTATAAGAGATTCACTTGAAGACCCTTATAGTTATTTGAAGTCTTCCTGGAATTTTAACAACAAAACAGAAGGATTTATCTGTAGGTTTACGGGGGTTGAATGTTGGCACCCTGATGAAAACAGAGTCTTAAATCTCAAGTTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCAAGCTTAACAGGATTAGATCTTTCAATTAACAAACTTTCTGGAGCTATTCCAGCAGATTTCTCTGTTCTTCTTAAATTTGTGACAACTCTTGATCTATCTTCAAATGATTTTTCTGGGGAGATCCCTTTGGGCCTTGCAAATTGTACTTACCTTAATTCCCTCAAACTTGACCAGAATCGGCTCACCGGTCAAATTCCTGCTGAATTTGGCCTGCTCTCGCGGCTTAAGATATTTACTGTCACCAACAATCTTTTGACGGGGCCAGTTCCAAACCTTGGAAAAATTACAGCAGATAGTTATGCAAATAATCCAGGACTTTGTGGTGGCCCCTTGGCGCCTTGCCAGGGCAAGCCTTCTAAGAGCAATGCTGCAGTTATAGCTGGAGCAGCTGTTGGTGGGGTGGCTGTTGCTGCATTAGGATTGGGTATTGGATTGTTCTTCTTTGTGCGCCGAGTTCATGTGAAGAAGGAAGAGGACCCCGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAAGGAATAAAGGTTTCAATGTTTGAGAAGTCAATCTCAAAAATGAAATTGAGTGATCTAATGAAGGCTACTAGAAACTTCAGTAAAGGCCATATTATTGGGTCAGGAAGAACAGGAACTGTGTACAAAGCTATCCTTGATGATGGCACGTCACTCATGGTTAAGAGATTGCAGCAATCTCAACACTCGGAGAAAGAATTTCTGTCAGAGATGGCTACACTGGGGACTGTCAGACATCGTAACTTGGTTCCTCTTTTAGGTTTTTGCGTGGCCAAGAAGGAGAGGCTTTTGGTATATAAAAATATGCCAAATGGCACTCTTCATGATCTCCTACATCCTGCTGATGGTCAGAGCACCATGGAGTGGCCCTTAAGGCTTAAAATTGCAATTGGGGCAGCCAAAGGTTTAGCATGGCTTCATCATAGTTGCAATCCCCGTATTATCCACCGAAACATAAGCTCTAAGTGCATCCTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGACTGATGAATCCAATTGATACACATTTGAGTACGTTTGTAAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAGTATACAAGAACATTGGTGGCTACGCCTAAGGGGGATGTTTATAGCTTTGGGACCGTGCTTCTTGAGTTGGTGACAGGTGAAAGACCAACCTATGTGGCTAAAGCTCCAGAAACTTTCAAAGGAAATTTGGTAGAATGGATTACACATCTCTCAAGCAGCTGTCAACTCCAGGATGCCATTGATGAATCATTAGTAGGGAAGGGTGCTGATAGTGAGCTTTTCCAATTTCTTAAGGTTGCATGCACCTGTGTTCTACCAACTCCAAAGGAGAGGCCCACTTTGTTTGAAGTATGCCAGCTTCTAAGAGCCATTGGGGGTAGATACAATTTCACAACTGAGGATGAGATATTGGTACCTACAGATATTGGTGATGCTGATAATTTAGAGGAACTTATTGTAGCTCGAGAAGGAAATGATTAA 1845 0.4211 MKMVLSSRIFSAHIIINFWLLLSRSVTYGTETDIYCLKTIRDSLEDPYSYLKSSWNFNNKTEGFICRFTGVECWHPDENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGAIPADFSVLLKFVTTLDLSSNDFSGEIPLGLANCTYLNSLKLDQNRLTGQIPAEFGLLSRLKIFTVTNNLLTGPVPNLGKITADSYANNPGLCGGPLAPCQGKPSKSNAAVIAGAAVGGVAVAALGLGIGLFFFVRRVHVKKEEDPEGNKWARSLKGTKGIKVSMFEKSISKMKLSDLMKATRNFSKGHIIGSGRTGTVYKAILDDGTSLMVKRLQQSQHSEKEFLSEMATLGTVRHRNLVPLLGFCVAKKERLLVYKNMPNGTLHDLLHPADGQSTMEWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTYVAKAPETFKGNLVEWITHLSSSCQLQDAIDESLVGKGADSELFQFLKVACTCVLPTPKERPTLFEVCQLLRAIGGRYNFTTEDEILVPTDIGDADNLEELIVAREGND 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1563 614 Gene3D Transferase(Phosphotransferase) domain 1 377 592 - -
Glsi07g1563 614 Gene3D Ribonuclease Inhibitor 31 218 IPR032675 -
Glsi07g1563 614 FunFam Nuclear pore complex protein NUP107 30 194 - -
Glsi07g1563 614 CDD STKc_IRAK 308 576 - -
Glsi07g1563 614 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
Glsi07g1563 614 ProSiteProfiles Protein kinase domain profile. 302 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1563 614 SUPERFAMILY L domain-like 31 194 - -
Glsi07g1563 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 37 194 - -
Glsi07g1563 614 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Glsi07g1563 614 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 377 589 - -
Glsi07g1563 614 Pfam Protein kinase domain 303 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1563 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 263 376 - -
Glsi07g1563 614 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1563 Glsi-ChrGlsi07 49226728 49229024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1563 19 590 Receptor kinase-like Gene Family AT3G28450 46.724 1.05e-178 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Glsi07g1563 Pkinase 3.4e-38 CL0016