Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1559 ATGGATTCGCTTTCTATAATTCTCCCTTCTTTCCCACTCTTCAAAAACCACCCCAAAACCCAGAAACTGACTACCTTCAAACCCTTCAATATACTCTCATGCCTCAAACCATCTGATTCTGCATTCCAATCTTTATGTTCTCGTCATGCTTATCTTTCCTCCCTCAAGCAGATTCCCATTTCACTCCGAACCCATTCTCCAACTTCCCTTCAAAATAATCGTTATCTTATCCGGAACACTCCAGTGTTGCAAAATTTAGCCAAGTACTTTTCTTTTACTGTCATTGACCTTTTTACGGCTTTTCCTTGCATTGCTTCTGAAGATGTGGCAGTGCCAGATTCAGGCAAAATTAAGTTGGAATCAATTTTAGTTTCAATTGATGAGTTTTTCAGTAGATACCCTTTTTTTGTTGCTGGGTGTACCTTCATTTGGCTGGTTGTTATACCTCTGACTCAAGAGTATTTCAGAAAATACAAATTTATATCCGCCATTGATGCATTTCGAAAGCTCCGGGATGACCCTAATTCTCAGCTCTTGGACATAAGAGATAAGAAGAATTTGAAGTTCTTGAGGTCTCCCAATTTGAAAATTTTGAATAAGGAAGTAGTGCAGGTTGAGTTTTCGGATGGAGATGAAGATGGGTTTGTCAGGAAGGTGTTGGAGAGCTTCAACGACGCGCCAAATACTATAATCTGCATTCTGGACAGTTTTGATGGTAAATCCATGAAAGTCGCCGAGTTACTATTCAAGAATGGCTTCAAGGAGGCCTATGCAATCAAAGGTGGAGTCAGAGGTCAGCAAGGGTGGATGGAAATACAGGATACCCTCTTGCCGCCTTCTGTACATATTTACCCAAAGAAAAAGGTTAAAGCTTCACAACAACTTAGCAGTACAAATGGAGGCGTTCAGCAAAATGAAGATAATTACAGGACTGCCTTATCCTCTGATGTCTCTGTGTCTGAAAATCAAAGGACAGACAATGGCTATGTGAAAAAATCTGCGGAATCCTTTTCAGATGTGAAAATTGATTCTATAGCTTCCTCCTCTCCCTATCCAAATTACCCTGATCTGAAGCCACCAGCGTCCCCAACTCCATCAAAGCCAAAATAA 1110 0.4063 MDSLSIILPSFPLFKNHPKTQKLTTFKPFNILSCLKPSDSAFQSLCSRHAYLSSLKQIPISLRTHSPTSLQNNRYLIRNTPVLQNLAKYFSFTVIDLFTAFPCIASEDVAVPDSGKIKLESILVSIDEFFSRYPFFVAGCTFIWLVVIPLTQEYFRKYKFISAIDAFRKLRDDPNSQLLDIRDKKNLKFLRSPNLKILNKEVVQVEFSDGDEDGFVRKVLESFNDAPNTIICILDSFDGKSMKVAELLFKNGFKEAYAIKGGVRGQQGWMEIQDTLLPPSVHIYPKKKVKASQQLSSTNGGVQQNEDNYRTALSSDVSVSENQRTDNGYVKKSAESFSDVKIDSIASSSPYPNYPDLKPPASPTPSKPK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1559 369 Gene3D - 157 281 IPR036873 -
Glsi07g1559 369 ProSiteProfiles Rhodanese domain profile. 216 278 IPR001763 -
Glsi07g1559 369 MobiDBLite consensus disorder prediction 353 369 - -
Glsi07g1559 369 MobiDBLite consensus disorder prediction 292 333 - -
Glsi07g1559 369 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 143 269 IPR036873 -
Glsi07g1559 369 CDD RHOD 167 265 - -
Glsi07g1559 369 MobiDBLite consensus disorder prediction 292 332 - -
Glsi07g1559 369 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 47 280 IPR044240 -
Glsi07g1559 369 MobiDBLite consensus disorder prediction 345 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1559 Glsi-ChrGlsi07 49164755 49173172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1559 120 289 Sulfurtransferasese or Rhodanese AT4G01050 38.728 4.56e-27 110