Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1528 ATGCGCACCTTCTTGATAATCTTCTTCCTCTTAACCTGCGCACCTCTGCACCTAAGCTCCAAACCCTTCGTTTCTCCAAGCCGCAGGATCCTCCACCAACCCTTCGTGCCATTGGACACTCTCCCTCCATCTGAGCCTCCAAACCCTCCTCCCCTTGCTCCTTCCTCACCTGCACCACCAAACGCCAAGTACCCATTTTCCTCTACTACCCCTAACCAGCCACCCTTTTTCCCTACCTACCCTTCCCCTCCTCCTCCTCCTTCCCCATCTACCTTTGCCTCCTTCCCTGCTAACATCTCCTCCCTTATCCTCCCCCAGACCCCCAAATCCAAATCCTCTTCTGGGAAACTCGTCGGAGTTGCCATTGCTGCTGTTGTCTGTGCCGTTGTGGTTGTCGGCATTTCCGCCTTCGTCTATTGCAGGCGAAGAAGGAATCGTTACGCTGCCGATGAGAAGACTCTCAGATCCGATATTAGTCTCAGGCTATTCCCGGCCAATGCCGAAACCGCCAATGGAAGTGGCAAGGTGAGACACACCTCGTCGACTAGCTCTGAGTTTCTCTATCTGGGCACTATTGTTAATTCCAGGGGTATCGATGACCGTCCTGATTCTCGTGGCAATGATGGTGGTGGCGCTGCTTTGGACCCTCGAAAAATGGACTCACCGGAGCTCCAACCGCTTCCGCCGCTCTCACGGCAAGCTTCAAGGCAGCAACATGGAGCGGTGCGTGATGAAGTGGGTTCAACAACAGCGGACGATGAAGAAGAGGAGTTCTACTCGCCGAGAGGGTCTTTGGGTGGTCGTGAGAGCTCAAGTGGAACTGGATCAGGTTCCCGAAGAGTCTTTGCAGCCATTGCAGGAGAGAATTTTGCTGGTCGAAGCTGCGAATCAAGTTCTAGTTCGTACTCTTCTTCCACTTCGGGCTCGCCGGATCGGTCCCATTCGATTAGCCTGTCACCGCCTGCGAGCTTGAGTCCCAGAAGGTCGCAAGCGATATCACCAGAAGCTACAGTGGTCCACGGTCCTTATCCGCAGCCGTCCCCACCGCCACCACCACTTGCACAACCGCAGACTGAAACACACTTGGGTGATGGAAGAGTCTCTCTGTCATCATCTTTACTTTCATCGCCAGAGAGAAGCCAAGTTGTATCACCTGCATTATCCTCAGTTCATAACCCATATGTGCAAGCTTCTTCGATGTCTTCGTCTTCTTCAACACCTGAGAGAGCTTTTGGTCGGGATATTCAATCTCCTTTGCTGTCTTCACTCTCCTTATTACCGAATAGAGCTTCAGACAAGAACCCAGATGGGGCAGTGAGAGCATTGGATGTCAAGTTTGAAAATAGGCATTCTTCTTCGCCATCTCCTGTATTCTCATCACCAGAGAAATATGGTGATAAAAATTCAGATGCGTCCCCAGAGAGAAGTACGGGGAAGGTTTCGCATCCGTCCCCAAGATTAACCGATTCATCACTGGAGAGAATTTTGGAGAAAATTTCATGTGCGTCACGAAGAATATCCACTACATCACCGAAGAGAAATGGGGAGAAAAGTTCATGTGCGTCCCCAAGATTATCCACTGCATCACCAGAGAGAAGTGTGGAGAAAATTTCATGCGCGTCATCAAGATTATCCAATGCATCTTCGGAGAGAAATGTGGAGAAAATCTCATATGCGTCACCTAGATTATCCAATGCATCGAATGGAAGCGGGAAGTCTCTGTCGTCATCTTCGGCCTTCTCTCTGCCGTCGTCACCTGAAAAAGTGTTTAAGGACAAATTAGATCAGTCTCCAAGAATATCAAATGTTTCAGATCAGTATAGGCAATCTCCTCTGCCATCACGGCCTTTGACACCAACCCTACTTTCATCCCCAGAAAGAGAATTGAGCAACACTTCAGATCAGTCAGCCACAGTTGAAAATGTTTTGGTTCAAAGCAGATATTCTCCAGCTCCTCCTCCCCAACCACAGCGGAAACACTGGGAGATTCCAGTTCTCTCGACACTGATTGGTCAACCACCAACAATTGAAAATGTTTTGGATCAAAATGAGGAATCTCCTGCTCCTCCTCCCCCATCGCAGCGGAAACATTGGGAGATTCCAGTTCTCTCAACTCCTATTGCCCAGACTAGAGTTTCACTCCCTGTGCCACCACCACCACCTCCACCACCTCCTCCTCCCCAAAGACTGCGGAAGCACTGGGAAATTCCAGCTCCTTCAACACCCACTGGTCAGCCAGTTTCTAGGCCACCGGAACTAATACCTCCCTCAAGGCCTTTTGTGTTGCCAAACCCAACAACAAAGGTTTCTCCTGTTGAGTTGCCCCCAAATTCTCAAAATATGGGGATACCTGAGGAGACTCCAAAACCAAAGTTGAAGCCACTGCATTGGGATAAAGTAAGAGCAAGCTCTAATCGTGAAATGGTGTGGGATCAGTTGAGGTCGAGCTCTTTTAAATTGAATGAAGAAATGATTGAGACATTGTTTGTTGTGAATGCACCAAATCCAAAACCAAAGGATACTACTCCACGCTCAGTTCTTCCCCCACCAAATCAGGAGGAGAGAGTACTTGATCCTAAAAAGTCACAAAATATTGCAATTTTGCTACGAGCGCTTAATGTGACTATTGAAGAAGTTTGTGAAGCGCTGCTAGAAGGTAGTGCTGATACCCTTGGAACAGAACTACTTGAAAACTTGTTAAAGATGGCACCAAGCAAGGAAGAAGAATGTAAACTGAAGGAACATAAAGATGACTCGCCAACCAAGCTAGGTCCTGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCATTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATGGCTAATTTTGAGTCTGAAGTGGAGTATCTCAGGAAGTCTTTTGAAACTCTTGAGGCTGCCTGTGATGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCCGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAAATCGTGGTGATGCACAAGCCTTCAAGCTTGATACACTTCTCAAACTTGTTGATGTTAAAGGGGCAGATGGGAAGACCACCTTACTGCACTTTGTTGTACAGGAAATAATTAGAACTGAAGGTGCTCGTCTCTCAAGTACTAATCAAACTCCAAACACTACTTTGAGTGAAGATGCCAAGTGTAGGAGGCTTGGCCTACAAGTTGTTTCTAGTCTAAGTTCAGAGCTAGCAAATGTAAAGAAGGCTGCTGCGATGGATTCTGATGTGCTCAATGGTGATGTCTCTAAACTTTCCAAAGAAATTGCAAACATTACAGAGGTTGTGAAATTAAATGAAACGATAAAGCAAGATGAGAGCAGTCGGAAATTTACAGAATCAATGAACAAATTCATGAGAATGGCTGAGGAGGAGATCCTTAGAATTCAAGCCCAAGAAAGTGTTGCTCTGTCCCTTGTGAAGGAGATTACAGAGTATTTCCACGGCAATTTGGCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACAGTTCTTGACCGGGTCTGCAAAGAAGTTGGTATGATAAATGAGCGAACCATGGTTAGTTCTGCCCACAAGTTCCCAGTTCCAGTAAACCCTATGCTTCCACAACCCCTACCTGGATTACATGGAAGGCGACAATACAGCTCTTCAGATGATGACAGTCCGTCTCCTTAG 3705 0.4715 MRTFLIIFFLLTCAPLHLSSKPFVSPSRRILHQPFVPLDTLPPSEPPNPPPLAPSSPAPPNAKYPFSSTTPNQPPFFPTYPSPPPPPSPSTFASFPANISSLILPQTPKSKSSSGKLVGVAIAAVVCAVVVVGISAFVYCRRRRNRYAADEKTLRSDISLRLFPANAETANGSGKVRHTSSTSSEFLYLGTIVNSRGIDDRPDSRGNDGGGAALDPRKMDSPELQPLPPLSRQASRQQHGAVRDEVGSTTADDEEEEFYSPRGSLGGRESSSGTGSGSRRVFAAIAGENFAGRSCESSSSSYSSSTSGSPDRSHSISLSPPASLSPRRSQAISPEATVVHGPYPQPSPPPPPLAQPQTETHLGDGRVSLSSSLLSSPERSQVVSPALSSVHNPYVQASSMSSSSSTPERAFGRDIQSPLLSSLSLLPNRASDKNPDGAVRALDVKFENRHSSSPSPVFSSPEKYGDKNSDASPERSTGKVSHPSPRLTDSSLERILEKISCASRRISTTSPKRNGEKSSCASPRLSTASPERSVEKISCASSRLSNASSERNVEKISYASPRLSNASNGSGKSLSSSSAFSLPSSPEKVFKDKLDQSPRISNVSDQYRQSPLPSRPLTPTLLSSPERELSNTSDQSATVENVLVQSRYSPAPPPQPQRKHWEIPVLSTLIGQPPTIENVLDQNEESPAPPPPSQRKHWEIPVLSTPIAQTRVSLPVPPPPPPPPPPPQRLRKHWEIPAPSTPTGQPVSRPPELIPPSRPFVLPNPTTKVSPVELPPNSQNMGIPEETPKPKLKPLHWDKVRASSNREMVWDQLRSSSFKLNEEMIETLFVVNAPNPKPKDTTPRSVLPPPNQEERVLDPKKSQNIAILLRALNVTIEEVCEALLEGSADTLGTELLENLLKMAPSKEEECKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYMANFESEVEYLRKSFETLEAACDELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSSTNQTPNTTLSEDAKCRRLGLQVVSSLSSELANVKKAAAMDSDVLNGDVSKLSKEIANITEVVKLNETIKQDESSRKFTESMNKFMRMAEEEILRIQAQESVALSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHGRRQYSSSDDDSPSP 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1528 1234 SMART it6_source 782 1196 IPR015425 -
Glsi07g1528 1234 SUPERFAMILY Formin homology 2 domain (FH2 domain) 717 1193 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 341 356 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 711 753 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 292 332 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 769 792 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 712 732 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 197 666 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 1211 1234 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 36 68 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 502 584 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 39 61 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 361 429 - -
Glsi07g1528 1234 PANTHER FORMIN-RELATED 440 1228 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 833 857 - -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 597 645 - -
Glsi07g1528 1234 Pfam Formin Homology 2 Domain 785 1181 IPR015425 -
Glsi07g1528 1234 Gene3D Formin, FH2 domain 782 1190 IPR042201 -
Glsi07g1528 1234 Coils Coil 949 969 - -
Glsi07g1528 1234 ProSiteProfiles Formin homology-2 (FH2) domain profile. 782 1207 IPR015425 -
Glsi07g1528 1234 MobiDBLite consensus disorder prediction 474 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1528 Glsi-ChrGlsi07 43002289 43011590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1528 28 344 FH2 protein (formin) Gene Family AT3G25500 44.277 2.75e-29 125