Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1506 ATGCCAAATGTCTCCACTAATAGCTGTAGTAGTAGTCACTTATCAGTTATTGATTGCCAAATTTGTGGTGATCCACATTCAATTCTTCGTTTTGCATTTGTGGAGTTTGCAGACGAGCAAGGTGCAAGAACAGCTTTAAACCTTGGTGGCACTGTGCTTGGATACTATCCAGTCAGGTTCCTTCCTTCCAAAACTGCTATCCTTCCCGTGAATCCTACATTCCTCCCTAGGGTTTTGAAGTCAGGTTACTCTGGAGATTTATCTCCTAAATTAGCTTTGGATCTCTTGTCAGGGAATGCAAATGCTGCACTTATAGATATCCGAAATGAGGAAAGTGATGATCTGAGAGAAAGAGATGGTATTCCTGATCTTCGACGGGCTGCCCGGTTTTGCTATGCAAGTGTAACTCCACTTCAGGTCGATAGTTCTATCAGGAAGTTATTCAAGAGTAATAGAGACCTTGATGACTCCTTGATTGCTGCTGTTATTCGAAATTTGAAGATTGTAAAGCTAGGCTGGCCAGCAAATGGTGATGACCCCTGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGACAGCCGAGTCACAGAGATTAAGTTACCTAATCTTGGATTATCTGGATCATTGGGTTACCAGTTACAAACCATGACATCTGTGACCAACCTAGACATGAGTAGCAACAATTTTGAAGGTGGTATACCATACCAACTTCCTCAAAATTTGCAACAATTAAATCTTGCCAACAATAGGTTCACTGGGAATATTCCGTATTCTATTTCTGAGATGACTTCTCTTACATACCTAAATCTTGGTCACAATCAGCTGCAGAATGGACTGGATAACATATTTCAGAAGCTTTCTTCCCTGTCCACATTGGATCTCTCTTTCAATTCTCTGTCTGGCAATCTCCCTCAAAGTTTCAACTCACTTTCAAGCATGACCAACATGAATCTGCAAAACAACCAGTTTACAGGCACCATTGATGTCCTTGCCAATCTGCCTCTTGAAAATCTGAATGTGGAAAACAACCATTTTACAGGCTGGATATAG 1050 0.4133 MPNVSTNSCSSSHLSVIDCQICGDPHSILRFAFVEFADEQGARTALNLGGTVLGYYPVRFLPSKTAILPVNPTFLPRVLKSGYSGDLSPKLALDLLSGNANAALIDIRNEESDDLRERDGIPDLRRAARFCYASVTPLQVDSSIRKLFKSNRDLDDSLIAAVIRNLKIVKLGWPANGDDPCGQSWKGITCSDSRVTEIKLPNLGLSGSLGYQLQTMTSVTNLDMSSNNFEGGIPYQLPQNLQQLNLANNRFTGNIPYSISEMTSLTYLNLGHNQLQNGLDNIFQKLSSLSTLDLSFNSLSGNLPQSFNSLSSMTNMNLQNNQFTGTIDVLANLPLENLNVENNHFTGWI 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1506 349 SMART LRR_typ_2 286 309 IPR003591 -
Glsi07g1506 349 SMART LRR_typ_2 262 285 IPR003591 -
Glsi07g1506 349 Gene3D Ribonuclease Inhibitor 147 349 IPR032675 -
Glsi07g1506 349 Pfam Leucine rich repeat 240 299 IPR001611 GO:0005515
Glsi07g1506 349 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 167 349 IPR046959 -
Glsi07g1506 349 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 155 349 - -
Glsi07g1506 349 SUPERFAMILY L domain-like 178 348 - -
Glsi07g1506 349 SUPERFAMILY RNA-binding domain, RBD 16 260 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1506 Glsi-ChrGlsi07 35810276 35821516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1506 173 349 Strubbelig Receptor Gene Family AT3G14350 65.730 4.40e-71 232