Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1503 ATGATTGGTAGCATCCAAGTGCGCATAAAGAAGTCAGCACATCATGTTGAGGTCAATCTCTCCGAAACAAAAGGATATGAGAAGCATGTAATTGTTGATTTGTTCAAAGAAACATATGGCAAGATCATAAACAATTCATTACCTTGCAACCCAGATAACTGCCAAGCAATCATTTTATATGAGGCTGAGAAGCTTTCAACAGAATCCTTATTGTACATTAAGTGGATGCTGGAAAGGTATAAGGGATGCAATAAGGTCTTCTTTTGCTGCTCTGATGAATCAAAGCTCCAAACTGTCAAACCACTTTGCACCACTATTCGGCTTTCACCACCTTCAACCCCAGAGATCGTTGACGTTTTGGAATACATAAGAAAACAGGAAGGAATAGAATTGTCGCAGGACTTCCTAATGAAGGTTGTTGAGAAGTCAAAAAACATTCTCCGTCAAGCCATTCGCTCATTGGAGGCCACTTGCCAAAACAAGGATACCATCAAAGAATACGAGTTAATTTTGACTGGATGGGAAGATCATATTTCAAATATTGCTAAGAATATAATTGACGAGCAAAGTCCCAAACAAAGTCCTCAAAATACACTCTCTAGCTCTATAAAGGCATTGGAAGAGCAAATCTCATGTGTAATAGGCTTGCCCTTCAAAGACTAG 663 0.3906 MIGSIQVRIKKSAHHVEVNLSETKGYEKHVIVDLFKETYGKIINNSLPCNPDNCQAIILYEAEKLSTESLLYIKWMLERYKGCNKVFFCCSDESKLQTVKPLCTTIRLSPPSTPEIVDVLEYIRKQEGIELSQDFLMKVVEKSKNILRQAIRSLEATCQNKDTIKEYELILTGWEDHISNIAKNIIDEQSPKQSPQNTLSSSIKALEEQISCVIGLPFKD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1503 220 Gene3D - 3 111 IPR027417 -
Glsi07g1503 220 CDD HLD_clamp_RFC 111 166 - -
Glsi07g1503 220 Coils Coil 137 157 - -
Glsi07g1503 220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 164 IPR027417 -
Glsi07g1503 220 Gene3D - 112 172 - -
Glsi07g1503 220 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 10 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1503 Glsi-ChrGlsi07 35756030 35760261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1503 12 193 Core DNA Replication Machinery Family AT5G27740 31.383 1.98e-24 97.4