Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1497 ATGGCCGGCCTAGACTTGGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACGCCCTGACCTTCACTCCAATGAAGATGAGAACCAGGACCAGGACGACGATAACCTTCAAGGGCATGAGCTTGTTACCCGAAACACTGGAGGTTCGGGTGATGTAGTGGCTCACCGGCCGAGAGGTAGACCTCCCGGCTCTAAAAACAAGCCAAAACCGCCCGTGATCATCGCCAGAGAGAGCGCAAACACGCTTCGAGCTCATATCCTTGAAGTTAGTAGTGGTTGCGACGTATTTGACTCCGTGGCAAACTATGCAAGGAAGCGGCAGAGAGGGATCTGTGTCCTGAGTGGCAGCGGCACCGTAACCAACGTAACCTTGCGGCAGCCGGCTGCAGTTGGTGCCGTTGTGACGCTGGACGGGAGATTTGAGATATTGTCCTTGTCAGGTTCATTTTTGCCTCCTCCAGCTCCACCGGGTGCCACAAACCTAACTATATTTCTGGCCGGAGTTCAAGGTCAAGTTGTGGGAGGAAATGTTGCCGGTGCTTTGGTAGCATCTGGGCCTGTTATTGTTATTGCTTCCTCATTTACCAACGTAGCATATGAGAGGTTGCCCTTAGACGAAGAAGAATCAGTACAGATGCTGCAAGGGCAATCACCTGGCAACGCTAGCGGGGGCGGTAACACATTTCTCAACCCATCCTCGGGGCTGCCGTTCTTCAATTTGCCACTAAACTTGCCTCAGTTACCGGTTGATGGATGGGCTAGAAACTCAGGTGGGAGGTTCTGTATATCTGTTGGAACTTTTGTTATCTTAGCTGCTTCACCAGATTTGTTATCTTCTCTTTGCTTAGCTGATTCACCAGGAATTGAACTTCTACTATTTCCTGGAGAACTGTTACTATTGTGA 903 0.5028 MAGLDLGSASHFVHQLQRPDLHSNEDENQDQDDDNLQGHELVTRNTGGSGDVVAHRPRGRPPGSKNKPKPPVIIARESANTLRAHILEVSSGCDVFDSVANYARKRQRGICVLSGSGTVTNVTLRQPAAVGAVVTLDGRFEILSLSGSFLPPPAPPGATNLTIFLAGVQGQVVGGNVAGALVASGPVIVIASSFTNVAYERLPLDEEESVQMLQGQSPGNASGGGNTFLNPSSGLPFFNLPLNLPQLPVDGWARNSGGRFCISVGTFVILAASPDLLSSLCLADSPGIELLLFPGELLLL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1497 300 CDD DUF296 83 192 IPR005175 -
Glsi07g1497 300 Gene3D - 82 217 - -
Glsi07g1497 300 ProSiteProfiles PPC domain profile profile. 79 216 IPR005175 -
Glsi07g1497 300 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 210 - -
Glsi07g1497 300 MobiDBLite consensus disorder prediction 20 72 - -
Glsi07g1497 300 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Glsi07g1497 300 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 216 IPR014476 GO:0003680
Glsi07g1497 300 FunFam AT-hook motif nuclear-localized protein 82 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1497 Glsi-ChrGlsi07 34096082 34101501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1497 1 259 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 63.514 1.16e-93 277