Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1485 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGATACTCAGTACCGTAAATCCGGGCGATCAGGGAGCTTCAATCAGCAGCGAGGTTCCTCAGGCACGTACGTTAAGGGCGGCGGCGGCGGGCCCGCGCCTTCACCCTCGATCACCTCGGGTTCCTCACTACCCTCTAATCGGAATTTTAAGAGGTCTAATAATGCACATGGTGGGCAATCTAGGGTAAACCCTCCCCCTGTGAATTCAGCGGAGTCTAATAGTGCTTCTACAGGCCGGACGATCCCAAATGGTACGCATGTCCAACAACAATTACCTGGAGCATCTGATGCACCAGTTACAAATGCAGCTGTTAAGTCAACAGAATCCTCATCTGCACAGAAGAGCACCAGAATTGTTTGGAAAGCACCAACTCCTCGACCTTCCCCCATGAATTCTGACCCAGCAGCTCCTACAACCCCTGTTAAGGCCCCTGGAGATTCATCCAAGGCATATGCTTTTCAATTTGGGTCCATTAGCCCCGGTTTTATGAATGGGTTATCAATTCCTGCTCGTACGAACTCAGCTCCTCCTAATTTGGATGAGCAGAAAAGAGAACAGGCTCGTCATGATTCATTTGGACCTTTGCCTTCTGTGCCGACACCTCCAAAACAGCTGCCGCCAAGAAAGGATGCTGGTGTTGCTGACCAATCTAATGCTGGGGAGACTCATTCAGTCCCCAAAGCCAAAAAGGATGCTCAGTTGTCAGCCTTGCCCCCAGCAAGCCAGGTTCAGAAGCCTTCTGTTCTTCCCTTGACTGGGATTTCAATGGCAATGCCATACCACCACCAGCCGCAGGCAACCATACAGTTTGGTGGTCCTAACCCGCAGATTCAATCTCAGGGCGTGTCATCAGCATCTCTTCAGATGCCTATACCGATGCCTTTATCAATTGGAAATGCTGCACAAGTGCAACAGCAGGTTTTTGTTCAAGGTCTTCAACCTCTCCCTATACATCCTCAGGGTATTATGCATCAAGGCCAAAATATGAGTTTCACTCCTCCAATGGGTCCTCAGTTGTCCCATCCATTAGGCAACATGGGTATCAGTATCAACCCACAATATTCCCAGCAGCAAGGAGGAAAATTTGCTGGTCCTCGTAAAACTACTCCCGTCAAGATAACTCATCCTGAGACACATGAAGAGCTGAGACTTGACTTTGACAAAAAGGCAGATTCACATTCAGATGGTGGGTCCTCAGGTGCTAGGTCTTATCCTAATGTGCCTTCTCAGTCTCAACCTGTTCAATCATTTGCTGCTTCTCATCCTATCAACTATTATCCATCCAGCTCCTACAATAGCAGCTCTCTCTTTTTTCCACCTAGTTCTCTTCCTTTATCAAGCAACCAGATAACTCCTAATTCTCAGCCACCAAGATTTAATTATACAATGAACCATGGTCTCCAAAATGTGGGTTTCAAGAATCAATTATCACGTGGTTCCCTGCCTGTTAATAAAACTGGCATTTCTATTCCTGGCATTGTTGAAACACCTAATCCTGAACATTCCCATGATGTTCATAAAGTGACCTCATCAGCTACAGGAGGAGTAACTTCTGTGAATATTAAGCCAAGTGGTGGCTCTGGTATTGTTGACTCCTTGTTGTCCAATTCCAGTATATCTGGTGTTGAAATGAGTGAATCTCCTAGTTCTTCAGGGGCATCTGGTGATGCTAGCTCCTCTGTGCCTGAAAAAGTGTCTGAAACTGGTTCTGAAATCTCTTCACTACATTCTAAGTTGTCCAGTGATTCTTCAGTTTCAAGATCATTGACAAAACAACCTGCTGCAGTATCTGTGGAGAAGCTGACAACTACTCCCTTGACATCTTCTTTGGCTGCTGGGAGTGAGAATTCTATCTCAGTTTTGTCCAACAATGAAGGCAGAATGAAGGAATCTCTTAGTAGATCAAACTCTTTGAAAGATAATCAGAAGAAAACAGGGAAGAGAGGCCAATCACAGCATCAGGTTGTTGTACAATCTCCTACAGCGGCTAATGTGCCTTCTCAAGCTGTTGACATTGTTATGCATGATAGTGGAGTTTCTGAAACTGCAGAAACTAAAACAGACCATTCTGCAGCAAAGATCAGTGAAGATATCCCAGCCACTCCAGACACATTATCAGTTAGTGGTGTTAGCATTCCTAATACTGTTGAAATGAAGATTAATGGTTCTGCTGAAGGTTCTGCTTGCGTTTCAACTGAAGGAGCTGGTGCTCTAGCTGTTGATAGTTTGAACAATCATAAGCATGATAAGCTAGAGGATTCATCACAACAGGATAAACTATTAAAGCAGAATAATCTGGAAATGGGTGATAAAAATGAAAGATCTTCTGAAGTATACAAACAAAACATTAATGACAATGGAACTAAATTTAAACAAACTGAACAAGATGCAGCAAAGGTAACCTCTGAGTTTCTAACCCTGAAGACTGTACAACAAGGACAGAACGAATCTACAAATTGTAGAGTAGAATGTGATACGATGGGTGATAATTTAGGCATGTCCACCTCTGCTGATTTGGATTCTATCTCTTTAAATAGAAATGATAGTGTAGTTAGTAATCACACTGTTTTTGCTTATTCTGGTGCATCTGAAAAGCAGTCTGCTGATCTTTCTGAAGCAACATTGAAACATGGCAAGGATAGTGCAGAGAATGCTGACAGTGGCTCAGTGTCCCTTTCAGAGTCAGGTACAAAGGATAGACCTGTTTTAGAACCAAATAAGGTGAAAACTTCATTCAAAGGGAAGAAGAAGAGAAGGGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCGTACAAGGGACCTGAGGAAAAGAAAGATGCTGTCGTAAGTATAGATGGCACAGAAAGTACTTCTGCTTCTGGTAGTTTGAAGCAGTTGCCTACAGATGCTGCTCAACCAGATCCTATAGCAAGTGAGAAAGATGGACAGAATAAAGCTGAGCCTGAGGACTGGGAGGATGCTGCTGATGTGTCCACCCCAAAATTGGAAGTTGCAGATAAAGCTCAGCAGATTAGTGATGGAAGTGAATTTACAGCCAAAAAATACTCCCGAGATTTCCTTTTGAAATTTGCAGAGCAATGCATTGATCTTCCTGAAGGTTTTGAAATTACGGCAGACATTGCTGAGGCATTGATGAGTGCTAATGTTAGTATTTCTCATGTTGAACGCGATTCACATCCTAGTCAAGGAAGAATTATAGATAGGCCGGGTGGGATGTCTCGGATGGACCGCCGTGGGAGTGTTGGGTTTGAGGAAGACCGATGGAGTAAAGTCCCTGGACCTTTTAATTCTGGACGTGATATGCGTTTGGATGGTTTTGGAGGTAATGCAGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCACGTGGACAAACACCTCTGCAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCCATAGGAAATCAGGGTGGTATGCAAAGAAATACCCCTGATGGTGAAAGATGGCAACGTTCTGCCAACTTCCAGCAGAGGGGTTTAATTCCTTCTCCTCAAACTCCATTACAAATGATGCACAGAGCTGAGAAGAAGTATGAGGTGGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGGCAGTTGAAAGCTATCTTAAACAAGTTAACCCCCCAGAATTTTGAGAAACTTTTTGAGCAGGTAAAAGCAGTTAATATTGACAATGCTGTCACCCTCACTGGTGTCATCTCACAAATATTTGAGAAGGCTTTGATGGAGCCTACCTTCTGTGAAATGTATGCGAATTTCTGCTTACATCTAGCTGCTGAATTGCCTGATTTCAGTGAAGACAATGAAAAGATAACTTTTAAGAGATTATTATTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGACGGTGAGGTCAAGCAGTCTGATGAAGAGAGGGAAGAGAAAAGAACTAAGGCAAGAAGAAGAATGTTGGGAAATATCAGATTGATTGGAGAGTTGTATAAGAAGAAAATGTTGACAGAGAGAATAATGCATGAGTGCATAAAAAAGTTACTGGGTCAGTATCAGGACCCTGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATATATATTTTGAAAGGATGAGATTATTATCAAACAACACGAATTTATCTTCTAGAGTGAGGTTCATGTTGAGGGATGCCATTGATTTGAGAAAGAATAAATGGCAACTAAAGAGGAAAGTTGAAGGTCCAAAGAAGATTGAAGAGGTGCACAGAGATGCTGCTCAAGAGAGGCAGGCTCAAGCTGGTAGGCTAGGTCGTGGTCCAGGTAACAATCCATCAACAAGAAGGATGGCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTATCTTCTCCTAACCCTCAGATGGGTGGACTGCGTGGGCTGCCTATGCAAGTTCGTGGCAGTGGTTCTCAGGATGTTCGTCTAGATGATAGGCAATCATATGAGGCTAGGACCTTGTCAGTTCCAATGACTCAAAGACCTTCAGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCTAGAGGAATGTCCTTTAGAGGGCCAGCAGCGATTCCAAGTTCTGTTCCGGATGTACTGCCAATCCCTGGAGACTCTCGAAGAATGACTGCTGGTCTTAATGGATATAGCAATTCATCAGAGCGTGCACTGTACAGCTCTAGGGAGGATCTCATGCCAATAAATGTTACGGATAGATTTGCTGGTCCAACTGCATATGACCAATTAGGTGGTCAAGAGCGTAATATGAATTATGGTAACAGGGAGTTGAGAAATGCAGATCGGAGTCTTGACAGACCTGTAGCAACTTTATCTTCTGCTGGACCAACTGTCTCCCAAAATGCTTCTTCAGAGAAGGTTTGGCCAGAAGAACGACTACGAGACATGTCCTTGGCAGCAATCAGAGAATACTACAGTGCTAGAGATGAGAAGGAGGTCGCTTTATGTGTCAGAGATTTGAACTCTCCAAGCTTTCATCCTTCGATGATTTCTCTATGGGTCACAGACTCTTTTGAGAGAAAGGATACAGAAAGAGATCTTTTGGCCAAATTGCTAGTCAACCTTGCAAAGTCTCAGGATGGCACCTTGAGTGAGGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTAAGTACTTTGGAGGATTCTGTTAACGACGCCCCCAAAGCAGCAGAATTTCTTGGCCATATTTTTGCGAAAGTTGTAACAGAGAATGTAGTCTCTTTGAAAGAGATTGGGCGACTTATACATGAAGGTGGAGAGGAGCCAGGCCGGCTTTTAGAAGTTGGACTTGCAGCTGATGTTCTGGGAAGCATGTTGGAGGTAATAAAATTGGAGAAGGGAGATGCTGTTCTAAGTGAGATATGCACAAGCTCCAACTTGCGGCTAGAAACTTTCCGGCCACCTGATCCTATTATATCAAGAAAGTTACAAATTTTTTTTAGCGGATAG 5607 0.4371 MSFNQSRSDKSDTQYRKSGRSGSFNQQRGSSGTYVKGGGGGPAPSPSITSGSSLPSNRNFKRSNNAHGGQSRVNPPPVNSAESNSASTGRTIPNGTHVQQQLPGASDAPVTNAAVKSTESSSAQKSTRIVWKAPTPRPSPMNSDPAAPTTPVKAPGDSSKAYAFQFGSISPGFMNGLSIPARTNSAPPNLDEQKREQARHDSFGPLPSVPTPPKQLPPRKDAGVADQSNAGETHSVPKAKKDAQLSALPPASQVQKPSVLPLTGISMAMPYHHQPQATIQFGGPNPQIQSQGVSSASLQMPIPMPLSIGNAAQVQQQVFVQGLQPLPIHPQGIMHQGQNMSFTPPMGPQLSHPLGNMGISINPQYSQQQGGKFAGPRKTTPVKITHPETHEELRLDFDKKADSHSDGGSSGARSYPNVPSQSQPVQSFAASHPINYYPSSSYNSSSLFFPPSSLPLSSNQITPNSQPPRFNYTMNHGLQNVGFKNQLSRGSLPVNKTGISIPGIVETPNPEHSHDVHKVTSSATGGVTSVNIKPSGGSGIVDSLLSNSSISGVEMSESPSSSGASGDASSSVPEKVSETGSEISSLHSKLSSDSSVSRSLTKQPAAVSVEKLTTTPLTSSLAAGSENSISVLSNNEGRMKESLSRSNSLKDNQKKTGKRGQSQHQVVVQSPTAANVPSQAVDIVMHDSGVSETAETKTDHSAAKISEDIPATPDTLSVSGVSIPNTVEMKINGSAEGSACVSTEGAGALAVDSLNNHKHDKLEDSSQQDKLLKQNNLEMGDKNERSSEVYKQNINDNGTKFKQTEQDAAKVTSEFLTLKTVQQGQNESTNCRVECDTMGDNLGMSTSADLDSISLNRNDSVVSNHTVFAYSGASEKQSADLSEATLKHGKDSAENADSGSVSLSESGTKDRPVLEPNKVKTSFKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKDAVVSIDGTESTSASGSLKQLPTDAAQPDPIASEKDGQNKAEPEDWEDAADVSTPKLEVADKAQQISDGSEFTAKKYSRDFLLKFAEQCIDLPEGFEITADIAEALMSANVSISHVERDSHPSQGRIIDRPGGMSRMDRRGSVGFEEDRWSKVPGPFNSGRDMRLDGFGGNAGFRPGQGGNFGVLRNPRGQTPLQYGGGILSGPMQSIGNQGGMQRNTPDGERWQRSANFQQRGLIPSPQTPLQMMHRAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADDGEVKQSDEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDIYFERMRLLSNNTNLSSRVRFMLRDAIDLRKNKWQLKRKVEGPKKIEEVHRDAAQERQAQAGRLGRGPGNNPSTRRMAMDFGPRGSSMLSSPNPQMGGLRGLPMQVRGSGSQDVRLDDRQSYEARTLSVPMTQRPSGDDSITLGPQGGLARGMSFRGPAAIPSSVPDVLPIPGDSRRMTAGLNGYSNSSERALYSSREDLMPINVTDRFAGPTAYDQLGGQERNMNYGNRELRNADRSLDRPVATLSSAGPTVSQNASSEKVWPEERLRDMSLAAIREYYSARDEKEVALCVRDLNSPSFHPSMISLWVTDSFERKDTERDLLAKLLVNLAKSQDGTLSEAQLIKGFESVLSTLEDSVNDAPKAAEFLGHIFAKVVTENVVSLKEIGRLIHEGGEEPGRLLEVGLAADVLGSMLEVIKLEKGDAVLSEICTSSNLRLETFRPPDPIISRKLQIFFSG 1868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1485 1868 FunFam Eukaryotic translation initiation factor 4G 1222 1457 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 1313 1342 - -
Glsi07g1485 1868 Coils Coil 1304 1324 - -
Glsi07g1485 1868 Gene3D - 1222 1457 - -
Glsi07g1485 1868 SMART ma3_7 1679 1793 IPR003891 -
Glsi07g1485 1868 FunFam Eukaryotic translation initiation factor 4G 1672 1865 - -
Glsi07g1485 1868 Pfam MIF4G domain 1222 1444 IPR003890 GO:0003723|GO:0005515
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 551 607 - -
Glsi07g1485 1868 SMART if4_15 1222 1444 IPR003890 GO:0003723|GO:0005515
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 45 129 - -
Glsi07g1485 1868 Gene3D - 1672 1864 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 178 253 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 643 658 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 659 674 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 1 156 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 880 936 - -
Glsi07g1485 1868 Pfam MA3 domain 1685 1791 IPR003891 -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 962 978 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 17 33 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 991 1008 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 631 674 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 956 1008 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 505 534 - -
Glsi07g1485 1868 SUPERFAMILY ARM repeat 1216 1446 IPR016024 -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 1456 1508 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 383 406 - -
Glsi07g1485 1868 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 353 1856 IPR045208 GO:0003743
Glsi07g1485 1868 ProSiteProfiles MI domain profile. 1678 1802 IPR003891 -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 366 427 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 407 427 - -
Glsi07g1485 1868 SUPERFAMILY ARM repeat 1674 1856 IPR016024 -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 1072 1092 - -
Glsi07g1485 1868 MobiDBLite consensus disorder prediction 519 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1485 Glsi-ChrGlsi07 32595760 32608407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1485 1 1865 Eukaryotic Initiation Factors Gene Family AT3G60240 45.619 0.0 1343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g1485 07 32595760 32608407 Glsi07g1485 07 32595760 32608407 ECH