Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1483 ATGGAGAAACACAACCCTAGAGAGAAAATCAAACATAGCTTGACCACAACAATGTGCATTTTGGCCAGTTCACAAGTCAAACGACATGCGGGGCTTCACTCAAACGGCTCGGGGGCATATTCTAGGTTTTCTCCCTCGTCTTCCTCCGAAGCCAACGAAATGACAAAGAGAACCAAGAAGGCCGGTATTGTTGGGAAATATGGCACCCGATACGGTGCTAGTCTTAGGAAGCAAATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAGTTCTGTGGGAAGTATGCTGTTAAGAGGAAGGCTGTTGGTATATGGGGCTGCAAAGATTGTGGAAAAGTGAAAGCTGGAGGTGCTTACACATTGAATACTGCCAGTGCCGTGACTGTCCGGAGCACTATAAGGAGGTTGAGAGAGCAGACTGAGGGTTGA 438 0.4703 MEKHNPREKIKHSLTTTMCILASSQVKRHAGLHSNGSGAYSRFSPSSSSEANEMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1483 145 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 57 125 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi07g1483 145 Gene3D - 54 145 IPR011331 GO:0003735|GO:0005840|GO:0006412
Glsi07g1483 145 SUPERFAMILY Zn-binding ribosomal proteins 63 135 IPR011332 GO:0006412
Glsi07g1483 145 MobiDBLite consensus disorder prediction 35 58 - -
Glsi07g1483 145 NCBIfam ribosomal protein eL43 54 144 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi07g1483 145 Pfam Ribosomal L37ae protein family 57 141 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi07g1483 145 PANTHER ZGC:171772 46 144 - -
Glsi07g1483 145 MobiDBLite consensus disorder prediction 35 52 - -
Glsi07g1483 145 FunFam 60S ribosomal protein L37a 55 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1483 Glsi-ChrGlsi07 32466913 32471786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1483 54 145 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 93.478 5.52e-60 178