Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1475 ATGCTGCCGACGACCATGAGGAGCTACGATTCATACGTGATTCGTCTTGACCCTGCTTTAGCCCATAAGCAAGCAACAGAGCTTAGAAGCTCTTATCTTTCAGGACTCAAGATTGAGAATTCGTGTGAAGTTGGGGTGTTTTCAAAACTTACCAACGCCTATTGTTTGGTTGCTCTTGGAGGCTCTGAAAATTTCTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATACCTGTGGTGAAGGCATCCATTGCTGGTACACGTATTGTTGGTCGCCTTTGTGTTGGAAACAAGAATGGGCTTCTATTGCCCCACAACACCACAGACCAAGTTATTACTGACACAGATGTGATGGTGGAAATGTATGAACGAGACCTGTTCTTTGAACTTCAACATTTGAGAAACAGCCTACCTGATCAAGTTGTTGTTCAACGTGTTGAAGAAAGATTATCTGCTCTAGGAAATTGTGTAGCATGCAATGATCATGTTGCCCTCACGCACACTGATCTTGACAAGTATACTGAGGAGGTGATTGCAGATGTTCTTGGAGTAGAAGTTTTCAGACACACCGTTGCTGGTAATATTCTCATTGGTAGTTACTGTGTCTTCTCCAACAAAGGTGGTTTGGTCCACCCTCATACTTCCATTGAAGACTTGGATGAGCTTTCTACACTTCTGCAGGTTCCTTTGGCGGCTGGAACAGTGAACCGTGGTAGTGAAGTAATAGCTGCTGGCATGACAGTTAATGACTGGACAGCCTTCTGTGGATCAGACACGACTGCAACAGAGCTCTCTGTGATTGAGAATGTTTTCAAGTTAAGGGAAGCCCAGCCTAATGCAATTGTAGATGAGATGAAGACTTCTCTTATTGATAGTTACGTCTGA 885 0.4384 MLPTTMRSYDSYVIRLDPALAHKQATELRSSYLSGLKIENSCEVGVFSKLTNAYCLVALGGSENFYSAFEAELADVIPVVKASIAGTRIVGRLCVGNKNGLLLPHNTTDQVITDTDVMVEMYERDLFFELQHLRNSLPDQVVVQRVEERLSALGNCVACNDHVALTHTDLDKYTEEVIADVLGVEVFRHTVAGNILIGSYCVFSNKGGLVHPHTSIEDLDELSTLLQVPLAAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIENVFKLREAQPNAIVDEMKTSLIDSYV 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1475 294 NCBIfam translation initiation factor IF-6 37 273 IPR002769 GO:0042256|GO:0043022
Glsi07g1475 294 Gene3D - 31 123 - -
Glsi07g1475 294 Hamap Translation initiation factor 6 [eif6]. 21 294 IPR002769 GO:0042256|GO:0043022
Glsi07g1475 294 CDD IF6 36 272 IPR002769 GO:0042256|GO:0043022
Glsi07g1475 294 FunFam Eukaryotic translation initiation factor 6 33 274 - -
Glsi07g1475 294 SUPERFAMILY Pentein 36 273 - -
Glsi07g1475 294 Pfam eIF-6 family 36 252 IPR002769 GO:0042256|GO:0043022
Glsi07g1475 294 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 36 293 IPR002769 GO:0042256|GO:0043022
Glsi07g1475 294 Gene3D - 126 274 - -
Glsi07g1475 294 SMART eIF6neu2 34 253 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1475 Glsi-ChrGlsi07 32175631 32180087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1475 36 294 Eukaryotic Initiation Factors Gene Family AT3G55620 78.764 1.17e-155 432