Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1469 ATGGCTTCACCTTCTTCGCCAGTAGACTCCACCCTGCCTCCAGGGCCGCCCTCGGCCGTGCCCCTTCCCCTCCCGGCACCACCCTCCTCTCGACGCCTTCCTCCGCCGTGCTGGTCGCACGATGAGACCGTCGCTCTCATCGACGCTTACTGCGACAAGTGGTATTCCCTCGGCCGTGGCAACCTCAAGGCTACTCACTGGCAAGAGGTCGCCGATGCGGTTACCGGCCGTTGCCCAAATGCCTCCCCGCCCAAAACCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTTCGCAAGCGATACCGTACCGAGATCCAGCGAGCCCGGTCCTTGCCCGTTGCCCGCTTCAATTCGTCTTGGGTCCATTTCAAGCGTATGGATTCCATGGAGAAGGGCCCCTCCCCGGTGAAGCCTGAGAACAATTCTGATAGCCCTGATGAGATTGACCACGACGACGACGACGACGACCAAGAATTGTACGAGGAATTCAAGAACGGAAGTGGGTCTAACACTAGGAGCTTGAATAAATTGTATAGGAACGGAATCGGTGGTTCTGACAGCGGCGGCGGCGGCGGAGGTGGGTTCCGGATTCGGATTCCAACAGGGGTGAGCATAGCGCAACCTGGGACCAAGTCTTATGGAAAGCTAGCTGAACAGAAATATAATCCCAATTCAAACTCTGCACCTAGCTCTAATTGCAGTCCCAATTTTGGGACGAGGGTTTTGAAAGAGAGAAGCGGATTGGGGAAGAGGGAGAGAGAGAGAGACCCTGTGGGAGAAATGGTGACTGCAATTAAGGTTTTGGGAGATGGATTTGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATTGAAACTATGAGGATGGAGATGGAAATGAAGCGTACTGAGATGATTTTGGAGTCTCAACAGCGGATTGTGGAGGCATTTGCGAAGGCTGTTTCGGAGAAGAAGAAGAAGGCAAAGAGATCATCGCCAGAACCATAG 993 0.5468 MASPSSPVDSTLPPGPPSAVPLPLPAPPSSRRLPPPCWSHDETVALIDAYCDKWYSLGRGNLKATHWQEVADAVTGRCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSLPVARFNSSWVHFKRMDSMEKGPSPVKPENNSDSPDEIDHDDDDDDQELYEEFKNGSGSNTRSLNKLYRNGIGGSDSGGGGGGGFRIRIPTGVSIAQPGTKSYGKLAEQKYNPNSNSAPSSNCSPNFGTRVLKERSGLGKRERERDPVGEMVTAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKKAKRSSPEP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1469 330 Coils Coil 91 111 - -
Glsi07g1469 330 MobiDBLite consensus disorder prediction 1 33 - -
Glsi07g1469 330 SMART 118neu2 45 134 IPR006578 -
Glsi07g1469 330 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
Glsi07g1469 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 28 318 IPR044823 -
Glsi07g1469 330 Gene3D - 38 103 - -
Glsi07g1469 330 MobiDBLite consensus disorder prediction 126 154 - -
Glsi07g1469 330 MobiDBLite consensus disorder prediction 9 33 - -
Glsi07g1469 330 FunFam Trihelix transcription factor ASIL2 38 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1469 Glsi-ChrGlsi07 31850561 31851553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1469 37 129 Trihelix Transcription Factor Family AT3G14180 37.634 2.89e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi07g1469 Myb_DNA-bind_4 1.5e-20 CL0123