Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1419 ATGGCCAGCGGATTCCCACATGCAATTGGAGTTGATCGAAGTTTTCAAACTGTTTTTCTTGCCGGGAAAGGATTAGAAGCTGATCAAGCCAAGAAAATGGAAGAAAAATCAATTGCACTTGATGCTATTATAAAGGAAGCTGTTGATCTGGAGAACATTCCTCTTGAGGAAGTTTTTGATAATCTCAAATGCACAAAAGAAGGTTTGAGCTCTGAGAAAGTAAAAGAGCGGCTGGACTTGTTTGGATATAATAAGCTTGAAGAAAAGAAGGAAAGTAAAATACTGAAGTTTTTGGGCTTCATGTGGAATCCTCTGTCATGGGTCATGGAAGCTGCTGCTATCATGGCCATTGCTATGGCACAGGGAGGGGGAAAGGGTGGAGATTATCAAGATTTTGCTGGCATAACTATTTTGCTAGTAGTAAACTCCACCATCAGTTTCATAGAAGAAAACAATGCTGGAAATGCAGCTGCTGCCCTTATGGCCCGATTGGCTCCAAAAGCAAAGGTACTCCGAGATGGAAAATGGAGTGAAGAAGATGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTGGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAAGGAGATCCTTTAAAGATTGACCAGTCTGCTCTTACTGGAGAGTCACTTCCAGTCACGAAAAATTCTGGAGATGGAGTATATTCTGGCTCAACTTGCAAGCAAGGAGAAATAGAAGCTGTAGTTATTGCAACTGGAGTCCACACTTTCTTTGGGAAGGCAGCTCATCTTGTGGAAAACACCACACATATTGGCCATTTCCAAAAGGTTCTAACATCCATTGGAAACTTCTGCATATGTTCAATTGCTATTGGGATGGTCATTGAAATCATTGTGATATATGGGATTGATGGAAGGGGCTACCGGGTTGGAATCGACAACCTCCTTGTGCTACTAATTGGTGGGATCCCTATTGCTATGCCTACTGTTCTTTCTGTTACAATGGCTATTGGTTCACACAAGTTGTCTCAACAGGGTGCCATAACCAAAAGAATGACTGCCATTGAAGAAATGGCAGGGATGGATGTGCTATGCAGCGACAAAACAGGAACATTAACTCTTAACAAGCTTACAGTAGACAAGAGCTTGATCGAGGTTTTCTCCAAAGGTGTTGACAAAGACATGGTCGTACTTATGGCAGCAAGAGCATCAAGGACAGAGAACCAGGATGCAATTGATTGTGCAATTGTTTCAACGTTGTCAGACCCAAAGGAGGCAAGAGCTGGAATAACAGAAGTTCATTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTTACTTACATTGATGAGGCCGGTAAGATGCACAGAGTCAGCAAAGGTGCACCAGAGCAGATTCTCCACCTTGCACATAACAAGTCAGAAATTGCGCAGAAGGTTCACGCAGTTATTGACAAGTTTGCAGAACGTGGACTTCGGTCCCTGGCAGTTGCTCGTCAGGAAGTACATGAGGGAACTAAAGACGGTGTAGGAGGCCCCTGGGAATTTGTTGGCCTTCTCCCTCTGTTTGATCCTCCCCGCCATGATAGTGCAGAAACAATCAGAAGAGCTTTGGATCTTGGCGTGAGTGTCAAAATGATAACTGGAGACCAACTTGCAATTGCTAAGGAAACAGGAAGGCGTCTAGGAATGGGCACAAATATGTATCCTTCCTCATCCTTGCTTGGTGAAAGCAAAGGTGAAACACTTGATGCTCTTCCCATTGATGAGCTCATTGAGAATGCTGATGGATTTGCTGGTGTCTTTCCTGAGCATAAGTATGAGATCGTGAAGAGATTACAAGCCAGAAAGCACATTTGTGGGATGACTGGTGATGGCGTGAACGATGCACCTGCCCTAAAGATAGCTGACATAGGCATAGCTGTAGCAGATTCCACAGATGCTGCTCGAAGTGCATCTGACATAGTTCTAACAGAACCCGGGTTGAGTGTGATCATAAGTGCTGTTTTGACTAGCCGTGCTATCTTCCAGAGAATGAAAAACTACACTATATATGCTGTATCCATCACTATACGTATTGTGCTGGGCTTTATGTTACTGACCTGCTTTTGGAAATTTGACTTCCCTCCCTTCATGGTTCTTGTCATTGCCATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGAGTTAAGCCTTCTCCACAACCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGATTGTCCTTGGTGGCTATCTGGCTCTAATGACAGTGATATTCTTCTGGGCAGCTTATGAAACTAGCTTCTTTCACAACAAATTTAATGTGGAAGACTTCAATTCACACAATCTCAACATGTCAGATTGGGTTGTCTCCAGTGAACTGAAAGAGAAGATGGGATCTGCAGTATATCTCCAAGTCAGCATAATCAGTCAGGCTTTAATCTTTGTGACCCGCTCCAGGGGATGGTCCTACACCGAACGCCCTGGTCTTTTGCTTGTCATTGCTTTCATTATTGCTCAGCTGATTGCAACAGTTATATCTGCCACGGTCTCATGGAGAATTGCTGGAATCAAAAGCATAGGTTGGGGCTGGACTGGTGTCATTTGGTTATACAATACTGTAACCTATGTTTTGCTGGATCCTATAAAATTTGCTGTCCGTTATGCATTAAGTGGAAGGGCTTGGAATCTGGTGGTAGACCAAAGAACGGCATTCACCAACAAAAACAACTTTGGTAGAGAAGCTCGTGAGGCTGCATGGGCTGCTGAGCAGAGAACCCTGCATGGCCTCCAATCTGCCGAGGCAAAGATGTTTGTAGAGAATAACACCTTCAGAGAAATAAATACACTGGCAGAAGAGGCTAAAAGGCGAGCTGAGATAGCAAGGTTGAGAGAACTTCACACTCTGAAAGGCAGAGTGGAATCATTTGCCAAGTTAAGGGGTTTAGACATTGATGCCATCAACGGGCACTACACTGTTTAA 2994 0.4365 MASGFPHAIGVDRSFQTVFLAGKGLEADQAKKMEEKSIALDAIIKEAVDLENIPLEEVFDNLKCTKEGLSSEKVKERLDLFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIAMAQGGGKGGDYQDFAGITILLVVNSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHIGHFQKVLTSIGNFCICSIAIGMVIEIIVIYGIDGRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFSKGVDKDMVVLMAARASRTENQDAIDCAIVSTLSDPKEARAGITEVHFLPFNPTDKRTALTYIDEAGKMHRVSKGAPEQILHLAHNKSEIAQKVHAVIDKFAERGLRSLAVARQEVHEGTKDGVGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGESKGETLDALPIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLTCFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPQPDSWKLSEIFATGIVLGGYLALMTVIFFWAAYETSFFHNKFNVEDFNSHNLNMSDWVVSSELKEKMGSAVYLQVSIISQALIFVTRSRGWSYTERPGLLLVIAFIIAQLIATVISATVSWRIAGIKSIGWGWTGVIWLYNTVTYVLLDPIKFAVRYALSGRAWNLVVDQRTAFTNKNNFGREAREAAWAAEQRTLHGLQSAEAKMFVENNTFREINTLAEEAKRRAEIARLRELHTLKGRVESFAKLRGLDIDAINGHYTV 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1419 997 Pfam haloacid dehalogenase-like hydrolase 359 636 - -
Glsi07g1419 997 SFLD Haloacid Dehalogenase 345 673 - -
Glsi07g1419 997 SFLD p-type atpase 345 673 IPR044492 -
Glsi07g1419 997 Pfam Cation transporter/ATPase, N-terminus 52 115 IPR004014 -
Glsi07g1419 997 CDD P-type_ATPase_H 68 888 IPR006534 GO:0008553|GO:0016020|GO:0120029
Glsi07g1419 997 Gene3D - 128 862 - -
Glsi07g1419 997 FunFam Plasma membrane ATPase 375 522 - -
Glsi07g1419 997 Gene3D - 375 522 IPR023299 GO:0000166
Glsi07g1419 997 FunFam Plasma membrane ATPase 166 250 - -
Glsi07g1419 997 SUPERFAMILY Calcium ATPase, transmembrane domain M 49 894 IPR023298 -
Glsi07g1419 997 ProSitePatterns E1-E2 ATPases phosphorylation site. 365 371 IPR018303 -
Glsi07g1419 997 Gene3D - 946 997 - -
Glsi07g1419 997 PRINTS H+-transporting ATPase (proton pump) signature 653 678 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g1419 997 PRINTS H+-transporting ATPase (proton pump) signature 594 610 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g1419 997 PRINTS H+-transporting ATPase (proton pump) signature 807 828 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g1419 997 PRINTS H+-transporting ATPase (proton pump) signature 479 497 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g1419 997 PRINTS H+-transporting ATPase (proton pump) signature 622 638 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g1419 997 Gene3D - 166 250 - -
Glsi07g1419 997 FunFam ATPase 4 plasma membrane-type 606 862 - -
Glsi07g1419 997 PRINTS P-type cation-transporting ATPase superfamily signature 517 528 - -
Glsi07g1419 997 PRINTS P-type cation-transporting ATPase superfamily signature 622 641 - -
Glsi07g1419 997 PRINTS P-type cation-transporting ATPase superfamily signature 213 227 - -
Glsi07g1419 997 PRINTS P-type cation-transporting ATPase superfamily signature 645 657 - -
Glsi07g1419 997 PRINTS P-type cation-transporting ATPase superfamily signature 363 377 - -
Glsi07g1419 997 PRINTS P-type cation-transporting ATPase superfamily signature 539 549 - -
Glsi07g1419 997 SMART Cation_ATPase_N_a_2 49 121 IPR004014 -
Glsi07g1419 997 NCBIfam plasma-membrane proton-efflux P-type ATPase 68 852 IPR006534 GO:0008553|GO:0016020|GO:0120029
Glsi07g1419 997 FunFam Plasma membrane ATPase 515 670 - -
Glsi07g1419 997 Pfam E1-E2 ATPase 164 342 - -
Glsi07g1419 997 PANTHER CALCIUM-TRANSPORTING ATPASE 51 930 - -
Glsi07g1419 997 SUPERFAMILY Calcium ATPase, transduction domain A 166 263 IPR008250 -
Glsi07g1419 997 SUPERFAMILY HAD-like 359 669 IPR036412 -
Glsi07g1419 997 NCBIfam HAD-IC family P-type ATPase 597 702 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g1419 997 NCBIfam HAD-IC family P-type ATPase 135 383 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g1419 997 Gene3D - 360 659 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1419 Glsi-ChrGlsi07 28330021 28342903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1419 39 997 Primary Pumps ATPases AT3G60330 78.854 0.0 1550
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g1419 07 28330021 28342903 Glsi07g1419 07 28330021 28342903 ECH