Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1404 ATGGCTTTGATAAGATCAAGGGTGCTAGGAGAAGGAGTTAGTAGTATAGTTTTCAAAGCAGTTCCTGTGGCTATACAAAGAGGCAACGAGGGGGTTAGAGCAGTCAAAAGTTCTCTTATGTTTTCTACGCTACAGAAGGAAGAAGCCATACTTAAATCTTTTATTGGCTGCACAGAAATAGTACAATGCTATGAGAGCCAAATCACTGTAGAAAACGGTCTGCTAATATATAATTTGATAATGGAGTTTGCCCCTCACGGTAGTCTTGCAAACCAAATCAAGAGTAAGCCATTTGTCGAAGATGAAGTAAAAATCTATACTCGTATGATTCTAAGGGGACTCTCTTGCATTCACCGAAAAAATATTGTCCACTGTGATTTAAAACCTGAGAATATACTTGTCTTTCCTTCATCTCAACCTGCTGCAAGTTATCAATTGAAGATTGCAGACTTCGGCCTATCTAAGACTAAGGAAGAGAACACTAATGCCAACTATTGGAGGTTTAAGTTCAGGGGAACTCCATTTTACATGTCTCCTGAGTCACTTGCTTTGGGCCAAATTGAAGCTCCTTTAGATATATGGTCACTTGGATGCATTGTTATAGAGATGATCACTGGGTTTCCCGCATGGTGGAAACTTGCAACTGCTGAAGATATCATGTTTGAGGTTGCAATAATGAAGCAAGCACCAGAGATACCAAATGGGGTGAGCCAGGATTGTAGAGATTTCTTGCATAAATGTTTAGCCGTGGACCCAAGAGGGAGATGGACCGCTGACATGCTTCTCAATCATCCTTTTATTCTTTCTCATTGTCCCATTATTAGTTAA 828 0.401 MALIRSRVLGEGVSSIVFKAVPVAIQRGNEGVRAVKSSLMFSTLQKEEAILKSFIGCTEIVQCYESQITVENGLLIYNLIMEFAPHGSLANQIKSKPFVEDEVKIYTRMILRGLSCIHRKNIVHCDLKPENILVFPSSQPAASYQLKIADFGLSKTKEENTNANYWRFKFRGTPFYMSPESLALGQIEAPLDIWSLGCIVIEMITGFPAWWKLATAEDIMFEVAIMKQAPEIPNGVSQDCRDFLHKCLAVDPRGRWTADMLLNHPFILSHCPIIS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1404 275 SUPERFAMILY Protein kinase-like (PK-like) 6 270 IPR011009 -
Glsi07g1404 275 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1404 275 Pfam Protein kinase domain 6 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1404 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Glsi07g1404 275 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1404 275 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Glsi07g1404 275 Gene3D Transferase(Phosphotransferase) domain 1 4 273 - -
Glsi07g1404 275 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1404 Glsi-ChrGlsi07 27753532 27754359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1404 1 267 MAP Kinase Kinase Kinase AT4G36950 38.571 6.29e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi07g1404 Pkinase 1.5e-50 CL0016