Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1403 ATGGCTTTGATAAGATCAAGGGTGCTAAGAGAAGGAGATAGCAGTATAGTTTTCAAAGCAGTTCCTGTGGCTATTCAAAGAGGCAACGAGGGGGTTAGAGCAGTCGAAAGTTCTCTTATGTTTTCTTCGCTACAGAAGGAAGAAGCCATACTTAAATCTTTTACTGGCTGCACAGAAATAGTACAATGCTATGAGAGCCAAATCACTGTAGAAAACGGTCGACTAATATATAATTTGATACTGGAGTTTGCCCCTCACGATACTCTTGCAAACCAAATCAAGAACTTCGGCCTATCTAAGACTAAGGAAGAGAACATTAATGCCAACTATTGGAGGTTTAAGTTCAGGGGAACTCCATTTTACATGGCTCCTGAATCACTTGCCTTGGGCCAAATTGAAGCTCCTTTAGATATATGGTCACTTGGATGCATTGTTATAGAGATGATCACCGGGTTTCCCGCAAGGTGGAAACTTGCAACTGCTGAAGATATCATGTTTGAGGTTGCAATAATGAAGCAAGCACCAGTGATACCAAATGGGGCGAGCCAGGATTGTAAAGATTTCTTGCATAAATGTTTAGCCGTTGACTGGGCCGGCCCAACACTTACGAAGAACACTTATGAAGGCCTAAAGTAA 636 0.4198 MALIRSRVLREGDSSIVFKAVPVAIQRGNEGVRAVESSLMFSSLQKEEAILKSFTGCTEIVQCYESQITVENGRLIYNLILEFAPHDTLANQIKNFGLSKTKEENINANYWRFKFRGTPFYMAPESLALGQIEAPLDIWSLGCIVIEMITGFPARWKLATAEDIMFEVAIMKQAPVIPNGASQDCKDFLHKCLAVDWAGPTLTKNTYEGLK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1403 211 Gene3D Transferase(Phosphotransferase) domain 1 77 199 - -
Glsi07g1403 211 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 93 196 - -
Glsi07g1403 211 Pfam Protein kinase domain 93 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1403 211 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1403 211 SUPERFAMILY Protein kinase-like (PK-like) 6 197 IPR011009 -
Glsi07g1403 211 SMART serkin_6 3 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1403 Glsi-ChrGlsi07 27685761 27686562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1403 1 193 MAP Kinase Kinase Kinase AT4G36950 29.688 3.57e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Glsi07g1403 Pkinase 1.7e-14 CL0016