Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1398 ATGTTCTCCAAATTGTTTTCCGCATTCATCTATCGCCAACTTTCTACCAGCACGAAGCTCCCGCAACTCTCAAAAATTCCCTATAGTTACAAGGAATTTGCTATACGAGAAGCCCAGAAGGCTCTCACTGACTACCTCCATGGTACTAGGTGCTTACCCTATGTTTACGCCGAGCAGATTGGCAAAAACTCTCTTGTTTCGCTCACTAATATCATTGCAAAGGTGGATTATTCGGCCTCCACTTTCTCAAAAAATTTAAAGAAATTCCTCAGGTACCACCCCATCAACGAGTTTGAATTTTTCTTTGAAAGCATAGGCATAGACTACAATGACGTTTCGAGGTTGTTGCCTACAAACAAGTTCTTCTTTTCCGAAGATGGGACTCTTCTCGATACGGCTGCTGCACTTTCGGAATTTGGGTTTCCGTGGAATGAGTTGGGTAAGTTGTATAAAGAGAGTAGTTGCATATTTATGAGAGGCGCGGCAGAGTTAAAGTCGAAGCTCTATGAGCTTAAGAAATACGGGTTTAGTAATATTCATGTGGTTGGCATTTGTTTAGCTTTCCCTTACATTTTGAGTGAGGAAGGTGATGTGGATGCTGAAATTGATGCATTGTTAACTGTTCTGAAATTGATATTTTTCGAGTTTGATTTAGCAAGATCTGTTGAGGGAAATGTGAAATCTTGGCATGAGGTCTGTAGGAAAATTCGGGTATTTTACGATTTAAATAGTGAGAAGGGGAAGTTAGGGAAGTTAATGGGAAGAAATAAAAGCATCTTTCTTGAACATGGAGAAGAGAATTTGATTAAAAAAGCAGAGTACTTCTGTAGATTCGGGAAGAGGGAAGAAGTAGCCATGTTACTTCTTCAGGACCCTGAATTGTTGAATCTTAATTTGGAGACGCCAGTGATTAATATAGTGAAGCTATTAACATTCTTTGACTTGACCGCTAAAAATCTGAAGGATGTTAGTCAAAATTATGATCATGTGATGGGAACAAACAAAATGGCTAATCTGCCTCAGATAATGAGGGCGTTGGATTTACATGAGTGGTTCTTTGATAAGATCAAGGATGGAAATCATCAGTCGTTAGTTAATTATTTCGCAAGCTATTCTACTGAAGACGAGGATAAAGAATACCAAAATGGCTTAGAGAAAATTCATGTTTCAAGGACCCCAGTTCATACCATGAGTAAATTAAAGTTGTTGCATGGTTGGGGTTTTGGAGAAAATGCTTTGACCTTGTGCGTCTTAGCTCACTTGCATGGTTCTAGTAGTGAATTACAGAAAAGATTTGATTGCCTTCTCTGTTTAGGGATTGAATACTCAAAGCTCTGTAAGATGGTAAGAATGGCCCCTAAGATTCTAAACCAAAACTTTCAAGCTATAGAGCAGAAGGTGAATTTCCTCTGTCAGGAGATGGGAACCTCCTTAGAGTATCTGTGCACATTTCCAGCATTTTTGTGTTTTGATTTAGAGAACCGCATTAAACCTAGGTATAGATTCCATATATGGCTTACAGAAAAGGGTCTGTGTACCAAAACCTATACCATTGCAAGTATTATTGCTACCAGCGAAAAGACTTTTGTAGCTCGTGTTTACAAAATGCACCCTGCTGCTCCAAAACATTGGTTTGAGCAATTCTCTTGCAGCAAGCTGCTAGTGTCACGATCTAGATATTTTGATCAACTATATAATCATATCATAGGTAGGACAGGAGAAATAACAACTGTCTCTTCCGCTTCCTCTGGGATCAATCTCATCTATATTGCCTCTTCCATTTGGTTTATTACTCCAGCAGGAGGTTGA 1809 0.3914 MFSKLFSAFIYRQLSTSTKLPQLSKIPYSYKEFAIREAQKALTDYLHGTRCLPYVYAEQIGKNSLVSLTNIIAKVDYSASTFSKNLKKFLRYHPINEFEFFFESIGIDYNDVSRLLPTNKFFFSEDGTLLDTAAALSEFGFPWNELGKLYKESSCIFMRGAAELKSKLYELKKYGFSNIHVVGICLAFPYILSEEGDVDAEIDALLTVLKLIFFEFDLARSVEGNVKSWHEVCRKIRVFYDLNSEKGKLGKLMGRNKSIFLEHGEENLIKKAEYFCRFGKREEVAMLLLQDPELLNLNLETPVINIVKLLTFFDLTAKNLKDVSQNYDHVMGTNKMANLPQIMRALDLHEWFFDKIKDGNHQSLVNYFASYSTEDEDKEYQNGLEKIHVSRTPVHTMSKLKLLHGWGFGENALTLCVLAHLHGSSSELQKRFDCLLCLGIEYSKLCKMVRMAPKILNQNFQAIEQKVNFLCQEMGTSLEYLCTFPAFLCFDLENRIKPRYRFHIWLTEKGLCTKTYTIASIIATSEKTFVARVYKMHPAAPKHWFEQFSCSKLLVSRSRYFDQLYNHIIGRTGEITTVSSASSGINLIYIASSIWFITPAGG 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1398 602 FunFam Transcription termination factor MTEF18, mitochondrial 384 544 - -
Glsi07g1398 602 Gene3D Transcription termination factor 3, mitochondrial 385 549 IPR038538 -
Glsi07g1398 602 Gene3D Transcription termination factor 3, mitochondrial 218 357 IPR038538 -
Glsi07g1398 602 Gene3D Transcription termination factor 3, mitochondrial 63 215 IPR038538 -
Glsi07g1398 602 Pfam mTERF 424 529 IPR003690 GO:0003690|GO:0006355
Glsi07g1398 602 PANTHER CGI-12 PROTEIN-RELATED 42 535 IPR003690 GO:0003690|GO:0006355
Glsi07g1398 602 SMART mt_12 446 477 IPR003690 GO:0003690|GO:0006355
Glsi07g1398 602 SMART mt_12 147 177 IPR003690 GO:0003690|GO:0006355
Glsi07g1398 602 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Glsi07g1398 602 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Glsi07g1398 602 SMART mt_12 478 512 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1398 Glsi-ChrGlsi07 27237239 27241715 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi07g1398 mTERF 1e-16 No_clan