Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1345 ATGGAAAGTGATGGTCAAGACTTCTTCTTCAATACATCCTCCTCCGCCTCCTCCTCCAACACCTCCACCACCATCCCCACCAACTCCACTACCACCACATCCTCCTCCTCCTCTTCATCTATATCAGCAGCATCTTCTAATTCAAACTCAATTCCAGGTACCAGGAAAGACTCTGAAAGTAACTTAAATGGCTGCAGAAAGAGGCAGAAAACTGACAGTGATGGAAAGCACCCAACATACAGAGGCGTAAGAATGAGAAATTGGGGAAAATGGGTATCTGAGATCCGTGAGCCAAGAAAGAAGTCAAGAATATGGCTTGGAACATACCCTACTGCAGAAATGGCAGCCAGAGCCCATGATGTAGCTGCTTTAGCCATCAAAGGTCACTCAGCTTACCTCAATTTCCCTGAATTGGCTCAAGAGCTTCCCCGGCCGGTCAGCTCGGCTCCCAAGGACATCCAAGCTGCTGCTGCAAAAGCAGCAGCCGCTATCATGGATGAGGTCAAACATTGTCAAGCTGAAGCTGAACCAAGCCAAGCAGAGCGGGCTTCATCTTCAACTCTGTCCATGGACAATGCTCAAGAGTCTTCAAGCTCTCCCTCTACTAATGACGAAGACACTTTGTTTGACCTTCCAGATCTATTCACTGATGGAAATATTGGACTTTGCTCCTACTCTTCTTGGCATTTATGTGTAGTTGATAGTGGTTTCAGGCTTGATGAGCCATTTTTGTGGGAGAATTACTAG 747 0.4685 MESDGQDFFFNTSSSASSSNTSTTIPTNSTTTTSSSSSSSISAASSNSNSIPGTRKDSESNLNGCRKRQKTDSDGKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPVSSAPKDIQAAAAKAAAAIMDEVKHCQAEAEPSQAERASSSTLSMDNAQESSSSPSTNDEDTLFDLPDLFTDGNIGLCSYSSWHLCVVDSGFRLDEPFLWENY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1345 248 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Glsi07g1345 248 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Glsi07g1345 248 MobiDBLite consensus disorder prediction 1 81 - -
Glsi07g1345 248 MobiDBLite consensus disorder prediction 1 59 - -
Glsi07g1345 248 MobiDBLite consensus disorder prediction 171 205 - -
Glsi07g1345 248 MobiDBLite consensus disorder prediction 178 205 - -
Glsi07g1345 248 Gene3D AP2/ERF domain 79 137 IPR036955 GO:0003700|GO:0006355
Glsi07g1345 248 FunFam Ethylene-responsive transcription factor 2 78 137 - -
Glsi07g1345 248 CDD AP2 80 138 IPR001471 GO:0003700|GO:0006355
Glsi07g1345 248 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Glsi07g1345 248 MobiDBLite consensus disorder prediction 60 81 - -
Glsi07g1345 248 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
Glsi07g1345 248 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 38 216 - -
Glsi07g1345 248 SMART rav1_2 79 142 IPR001471 GO:0003700|GO:0006355
Glsi07g1345 248 Pfam AP2 domain 78 129 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1345 Glsi-ChrGlsi07 23974896 23975642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1345 67 244 AP2-EREBP Transcription Factor Family AT2G44940 58.252 2.48e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi07g1345 AP2 2.8e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g1345 07 23974896 23975642 Glsi07g1345 07 23974896 23975642 ECH