Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1289 ATGGCTCTAATCACCCCTCAACTTCCACTCTCTCGTTTCCTCGCTCTTGTTGCTTTCTTTTCAGTCTTTCTAGTGAGCCCTTCTTCTTGCTCCAACTCCAGAAAGCTTCTTAATTGTTCATACTCCTCCTCTGGTTTGGATTGGTCTCCCGCAGTGGCCACTTGGTATGGAAGCCCCACCGGTGCCAGCAGTGATGGGGGAGCTTGTGGATATGGCAGTGCTGTTGAGGAACCTGCATTTGCTGCAATGGTGTCAGCAGGAGGCCCACCTTTGTTTAACTCAGGCAAAGGCTGTGGTGCTTGTTATGAGGTGAAGTGCACAGGGAATTCGGCTTGCTCGGGTAACCCAGTGAAGGTAGTTATCACTGATGAGTGTCCTGGGTGTGGCTCTACAGAGAGAGTTCATTTTGATTTGAGTGGCAATGCTTTCAGTGGCATGTCAGTTTATGGCCAGGATGAGAAGCTACGGAATGTTGGGATATTGGAGATTCAACATAGAAGAGTTGAATGCAACTATCGTGGTATGTCAATAGCATTTAAAGTGGACTCTGGATCCAACCCATACTATTTTGCTGTGCTGATTGAGTATGAAAATGGAGATGGTGACCTTGCTAGCGTTGAATTCAAGGAAGCCGTCGACTCAGCATCATGGCGTGCCATGCAACAGTCCTGGGGTGCAATTTGGAAGATTGGCTCAGGCTCACCACTTCAAGCTCCATTCTCTATCCGCCTAACCACACTGAAATCTGGCAAGAAGATTGTGGTGGACGAGGTGATTCCGGCTTGGTGGAATCCTGGTCAGACTTATCGATCAGTTGAGGCTACAATTCTGCTTATGGAGGTTCATCATTTTACAATCAAGGTGGGTATAGAAGTGCTAATGCAAGAGGTTTTCATGGTGATGGTAGATCAAGAGGCAGAGGAAGATCTAAGCACATTAGAGGAGCTATTAATTGCATGCCAACTTTATGGCAAGACAGAGGACCCAGCTTTGAATTTGCATGGTAGATATAATCAAGCATATCAAAGAACTCCTCAATAG 1041 0.4659 MALITPQLPLSRFLALVAFFSVFLVSPSSCSNSRKLLNCSYSSSGLDWSPAVATWYGSPTGASSDGGACGYGSAVEEPAFAAMVSAGGPPLFNSGKGCGACYEVKCTGNSACSGNPVKVVITDECPGCGSTERVHFDLSGNAFSGMSVYGQDEKLRNVGILEIQHRRVECNYRGMSIAFKVDSGSNPYYFAVLIEYENGDGDLASVEFKEAVDSASWRAMQQSWGAIWKIGSGSPLQAPFSIRLTTLKSGKKIVVDEVIPAWWNPGQTYRSVEATILLMEVHHFTIKVGIEVLMQEVFMVMVDQEAEEDLSTLEELLIACQLYGKTEDPALNLHGRYNQAYQRTPQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1289 346 SUPERFAMILY Barwin-like endoglucanases 42 174 IPR036908 -
Glsi07g1289 346 SUPERFAMILY PHL pollen allergen 177 271 IPR036749 -
Glsi07g1289 346 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 66 175 IPR007112 -
Glsi07g1289 346 SMART dpbb_1 84 165 IPR007112 -
Glsi07g1289 346 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 188 271 IPR007117 -
Glsi07g1289 346 PRINTS Major pollen allergen Lol pI signature 106 116 IPR005795 GO:0005576|GO:0019953
Glsi07g1289 346 PRINTS Major pollen allergen Lol pI signature 226 243 IPR005795 GO:0005576|GO:0019953
Glsi07g1289 346 PRINTS Major pollen allergen Lol pI signature 195 210 IPR005795 GO:0005576|GO:0019953
Glsi07g1289 346 PRINTS Major pollen allergen Lol pI signature 86 97 IPR005795 GO:0005576|GO:0019953
Glsi07g1289 346 PRINTS Major pollen allergen Lol pI signature 147 162 IPR005795 GO:0005576|GO:0019953
Glsi07g1289 346 PRINTS Major pollen allergen Lol pI signature 179 194 IPR005795 GO:0005576|GO:0019953
Glsi07g1289 346 Pfam Expansin C-terminal domain 177 260 IPR007117 -
Glsi07g1289 346 PANTHER EXPANSIN-B3 24 271 - -
Glsi07g1289 346 Pfam Lytic transglycolase 85 157 IPR009009 -
Glsi07g1289 346 CDD DPBB_EXPB_N 48 170 - -
Glsi07g1289 346 Gene3D - 35 170 IPR036908 -
Glsi07g1289 346 Gene3D - 171 272 IPR036749 -
Glsi07g1289 346 PRINTS Expansin/Lol pI family signature 257 271 IPR007118 GO:0005576
Glsi07g1289 346 PRINTS Expansin/Lol pI family signature 158 174 IPR007118 GO:0005576
Glsi07g1289 346 PRINTS Expansin/Lol pI family signature 217 231 IPR007118 GO:0005576
Glsi07g1289 346 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Glsi07g1289 346 PRINTS Expansin/Lol pI family signature 88 106 IPR007118 GO:0005576
Glsi07g1289 346 PRINTS Expansin/Lol pI family signature 47 62 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1289 Glsi-ChrGlsi07 21229305 21232838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1289 30 271 Expansin Gene Family AT1G65680 59.504 1.53e-105 308