Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1283 ATGGATTATTCCGGCTACCAACAACAACAGCGGCAGCAAACCTATGACCCGTCTCAAATTCAAACCTATGATCAGTCATCCCAATCATATTATGGCTACAATCAACAATATGACCAACAATACGGATACTTACCCTCAGCCCATCAACAATTCCAGCAAGAGCCCTCCTCGATTCACCCTCCTGGGGTCCCAATCCATTCCGAACAAGCTCGTACATCGGGTCCCGGACAGACCCAGATGCAAAATCAGCATAGTCTTCATTATCTTCCTGGGGTTTCGGAAAATCAACTGCAGCTGAATCCGGATTCCGGTGCGGCAGTCGCAGGCTCAATGAATCCAGCAGCCGCCGCAGCGGTAGCAGCTTTATCGCAGTTCACTCACTTTGCAGGGAACGTGGCTGTGGCGCAGAGGGCGACACATCCGCCGATTGGGCAGTCTCGAAACAGAGGTGGAGGTGGTAGGGGTGGTAGACCATTTAGACGGGGTGGTCGGGGCCAATTCAATCACCGAGGCCGAGCCCCTTACCGTGGTAGGGGACGTGGCCATGGTGGTGGTAGGCAATTCCCATCTCATTCTTCTGGACCAGCCAATTCTTATGTCGAATATGCACCTGCCGCTGATGTAGCCACTTCAGTGGCACAACCTTCATCATCAGTCCCTGGCCATATATCATTGCCTATACTTGCACAAGTGCCAACTGCACCATCACAGCCACCACCACGTAAGGCTTGGTGTGAAATTTGTAAGGTTGAGTGCAACACCCCTGAAATTTTGGAGCAGCATAAGAATGGAAAGCGACATAAAAAGAATTTGCAAGTACATGAGGAATTACAGAGACTCAAAGCTATAAATGGACTACAGAGTGGACAGATGCCTACTTCTCAATCGAATTTAACAGATCAGGCTGAGAAACATCAGGAGTTGAAGCGAAAAGGATCCCCTGCTGAAAATATGGGCTCTGAAGCTGCCAATGACAAACTGAAGGATGAAATTGAACTGCAGAATAATATAGGAGAGTCTTCTGAAGTTCCAGCCGATGAATCTGAGGGAAAACCCGGGGATAATTTTGCTACACGAGGACGTGGTTTTAAGCGTAAGATGAGAGGAGGCAGAGGAGGTAAACACATGAGGACTAATGATGGGTCAAGACGGCCAGTGGAACCTCCAAAACCTAAGCAGGCTATGCCTTTCATATGTGAGTTGTGCAATGTTAAATGTGAGTCACAGGTTGTTTATGACAGTCATGTTACAGGTAAAAAGCACTTATCAAGTCTCAAGCGTGTCCATGGCCACCAGGCTGTGTACAGCGAAGCAGGGCAGCCAGCACTTCACCCAACTGACATCACTGCTCTATCTAATTCAATTAACTCACAAGTCCAACAAGGTATTAATGATCCACAGGTCCTCTTGGCTCAGCTCCTAATGACTGTTCTATCTCAAGCCCAAGGATCAGCAATAGCACCACCATCAGGGTCTGTGGGTGCTCAGTTTTCAGTTCCCCCACCAGCAGCAGGATTAAGTTATGAACTCCAGTTTCAAAATGTCTTGCAGACACAAGTGTCAGAAAGCACAGCTCATGCTGGGAGTGAAAATCAGCATGGGGAAACAAACAATCAGTTGCTATCCATCCCACCAGAGGTCAATGCCCCTGCAGGTTTAAGTACTAACACCCAAACTGCAGTTGAAAGTTCTGAAACTGAAGAAAAGGTGTTAAAACCTCCTCAGAATAGCTCAGTTCTTACACCGGCGGAAAATCCAAGTGCAGCCCATGACCAAATACCTTCTTCAGAAAGCAAAGCTCCCAATTCACAGAAGCTTACAGAGCCGAAGAAGATATGA 1839 0.4774 MDYSGYQQQQRQQTYDPSQIQTYDQSSQSYYGYNQQYDQQYGYLPSAHQQFQQEPSSIHPPGVPIHSEQARTSGPGQTQMQNQHSLHYLPGVSENQLQLNPDSGAAVAGSMNPAAAAAVAALSQFTHFAGNVAVAQRATHPPIGQSRNRGGGGRGGRPFRRGGRGQFNHRGRAPYRGRGRGHGGGRQFPSHSSGPANSYVEYAPAADVATSVAQPSSSVPGHISLPILAQVPTAPSQPPPRKAWCEICKVECNTPEILEQHKNGKRHKKNLQVHEELQRLKAINGLQSGQMPTSQSNLTDQAEKHQELKRKGSPAENMGSEAANDKLKDEIELQNNIGESSEVPADESEGKPGDNFATRGRGFKRKMRGGRGGKHMRTNDGSRRPVEPPKPKQAMPFICELCNVKCESQVVYDSHVTGKKHLSSLKRVHGHQAVYSEAGQPALHPTDITALSNSINSQVQQGINDPQVLLAQLLMTVLSQAQGSAIAPPSGSVGAQFSVPPPAAGLSYELQFQNVLQTQVSESTAHAGSENQHGETNNQLLSIPPEVNAPAGLSTNTQTAVESSETEEKVLKPPQNSSVLTPAENPSAAHDQIPSSESKAPNSQKLTEPKKI 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1283 612 MobiDBLite consensus disorder prediction 344 361 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 521 612 - -
Glsi07g1283 612 SUPERFAMILY beta-beta-alpha zinc fingers 390 428 IPR036236 -
Glsi07g1283 612 SUPERFAMILY beta-beta-alpha zinc fingers 238 274 IPR036236 -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 1 81 - -
Glsi07g1283 612 SMART ZnF_U1_5 394 428 IPR003604 GO:0003676|GO:0008270
Glsi07g1283 612 SMART ZnF_U1_5 240 274 IPR003604 GO:0003676|GO:0008270
Glsi07g1283 612 MobiDBLite consensus disorder prediction 285 301 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 285 326 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 137 196 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 373 387 - -
Glsi07g1283 612 PANTHER OS06G0651300 PROTEIN-RELATED 8 520 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 521 603 - -
Glsi07g1283 612 Pfam Zinc-finger of C2H2 type 397 421 - -
Glsi07g1283 612 Pfam Zinc-finger of C2H2 type 244 267 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 1 57 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 163 179 - -
Glsi07g1283 612 Gene3D Classic Zinc Finger 231 276 - -
Glsi07g1283 612 Gene3D Classic Zinc Finger 374 427 - -
Glsi07g1283 612 MobiDBLite consensus disorder prediction 338 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1283 Glsi-ChrGlsi07 21068415 21074325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1283 397 425 C2H2 Transcription Factor Family AT5G61190 55.172 9.92e-06 47.0