Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1247 ATGCCTTGCTGCAGCTATCCAACTTTGGAGACAAAATTACCTGCATTACTCGTGAGTCTGATTCCAGCATTGAACGGATTGGCTGATAAGAATATTTGGTCATGGGTAATGGAAGTACCTTTACACATCAGTACGGACATACTTGCTGGAGCTACAAATTCAAGTGCTGCAACATCAGTTTGGGCTATGGCTGCACTGATGAAAGACCCTAGAGTTATGCAGAAAGGTCAAGTAGAAGTTAGAAATTGGTGTGGTAACAGAGGCTTTATAGATGAAGATGATATCCAAAAGTTTCCTTATCTTAAGATTTCAAGGGACAAAATTTTGAGCTTGATTCCCTCTAGTGCTGGGCATAGAATTTACCTGGGGTTGCATATGGAGGTCGTCACAGTGAAGCTTATACTTGCTAACCTTCTTTATTGGTTTGATTGGGAAATGCCTAAAGGGATGAAGAAGGAAGACATTTATTTGAAAATGCTTCCAGGAATTACCCAGCACAAGAAGAAGCCCCTTTGCCTGCAGGCCAAGAATTGCAGGGCTTAA 543 0.4162 MPCCSYPTLETKLPALLVSLIPALNGLADKNIWSWVMEVPLHISTDILAGATNSSAATSVWAMAALMKDPRVMQKGQVEVRNWCGNRGFIDEDDIQKFPYLKISRDKILSLIPSSAGHRIYLGLHMEVVTVKLILANLLYWFDWEMPKGMKKEDIYLKMLPGITQHKKKPLCLQAKNCRA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1247 180 Gene3D Cytochrome P450 104 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1247 180 Pfam Cytochrome P450 44 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1247 180 Gene3D Cytochrome P450 27 103 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi07g1247 180 PANTHER TRYPTAMINE 5-HYDROXYLASE 107 176 - -
Glsi07g1247 180 SUPERFAMILY Cytochrome P450 41 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1247 Glsi-ChrGlsi07 19597093 19598112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1247 110 173 Cytochrome P450 AT5G57260 46.875 3.34e-13 65.1