Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi07g1246 | ATGGTGTCACTTCTTCTATTCCTATGTCTAACTCTCCCTGTGTTGCTATTGTCCTTGCTCCACAAATACAGAACCATCAAGAGTCCATCTACTTCACCAGGTCCTACAGGCCTTCCCATAATCGGGAACCTTCATCAGTTAGATAACTCTGCTCTTCCTCAACAACTACGGCAGCTCGCAAAGACATATGGGCCTATCTTTTCCCTTCAACTCGGTTTCAGGCCAGCAATTGTTGTTTCTTCCCCTAAATTGGCCAAAGAGGTCCTCAAAACTTATGACCTTGAGTTTTGTAGCCGACCTTCCTTGCGTGGGCAGCAGAAACTGTCCTACAATGGCTTAGAGATATTATTCTCCAGATACAATGATAATTGGAGAGAATTCAGAAAAATTTGTGGTTTGCATATCTTCAGCCCAAGGCGTGTCTCAAGCTTTTCCCCTATAAGACAATTTGAGGTCAAGCGAATGATTCAAAACATATCAAGACAAGCTTCTTCTTCGGAAGTTACCAATTTGAATGAGATATTGATGTCTCTTACAAGAACGATAATTTGCAGAATTGCTTTTGGAAGAAGGTACGAGGAGGAAGGAGCAGAAAGGACCAGGTTCCGTCGGTTGTTCAGAGAAATTGAGGAAATGATATTTGCCTTCTTTGTCTCTGATTATATTCCTTTCACCGGATGGATTGATAAACTAACTGGATTACATGCTCGTCTGGAAAGATTATTCCAGGAGCTGGATACATTTTACCGAGAAATCATCGACGAACACCTTGATCCAAATAGACAAAAATCAGATGAAGAGGACGACATCATCGATGTCTTGCTGGAGCTGAAGAAGCAGCATTCGTGTTCGTTTGATCTCACTTATGATCATATCAAAGCAGTAGCCATGGACATTCTTCTCGGAGGAACAGATACAAGTACTGCAACATCAGTTTGGGCTATGACTGCACTGATGAAAGAACCCAGAGCAATGCATAAAGTTCAAGCAGAAGTAAGAAATTGTTGTGGTAACAGAGGACTTATAGATGAAGATGATATCCAAAATCTTCCTTATCTTAAGGCAGTTATAAAAGAGACATTTAGACTATACCCTCCAGTGCCACTACTAGTACAAAGAGAAGCACGTAAAAAATGCATAATAGAGGGATATGAGATTCAAGACAAGACACTAGTTTATGTGAATGTATGGGCTATTCAAAGAGACCCAGAAGTTTGGAAAGACCCAGAAGATTTCTATCCCGAGAGGTTCTTAAACTGCGCTACAGATTTCAAGGGACAAGATTTTGAGCTGATTCCCTTTGGTTCAGGGCGTAGAATGTGTCCAGGGTTACCCATGGGGGTTGTCACAGTAGAGCTTATACTTGCTAACCTGCTTTATTGGTTTGATTGGGAACTGCCAAAAGGGATGAAGAAGGAAGACATAGACACTGAAATGCTTCCAGGACTTGCCCAGCATAAGAAGAATCCTCTTTGCCTTCTGGCCAAGAACCACGCGTGA | 1500 | 0.4187 | MVSLLLFLCLTLPVLLLSLLHKYRTIKSPSTSPGPTGLPIIGNLHQLDNSALPQQLRQLAKTYGPIFSLQLGFRPAIVVSSPKLAKEVLKTYDLEFCSRPSLRGQQKLSYNGLEILFSRYNDNWREFRKICGLHIFSPRRVSSFSPIRQFEVKRMIQNISRQASSSEVTNLNEILMSLTRTIICRIAFGRRYEEEGAERTRFRRLFREIEEMIFAFFVSDYIPFTGWIDKLTGLHARLERLFQELDTFYREIIDEHLDPNRQKSDEEDDIIDVLLELKKQHSCSFDLTYDHIKAVAMDILLGGTDTSTATSVWAMTALMKEPRAMHKVQAEVRNCCGNRGLIDEDDIQNLPYLKAVIKETFRLYPPVPLLVQREARKKCIIEGYEIQDKTLVYVNVWAIQRDPEVWKDPEDFYPERFLNCATDFKGQDFELIPFGSGRRMCPGLPMGVVTVELILANLLYWFDWELPKGMKKEDIDTEMLPGLAQHKKNPLCLLAKNHA | 499 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi07g1246 | 499 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 434 | 443 | IPR017972 | GO:0005506|GO:0016705 | |
| Glsi07g1246 | 499 | SUPERFAMILY | Cytochrome P450 | 33 | 495 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | Gene3D | Cytochrome P450 | 26 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | P450 superfamily signature | 432 | 441 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PANTHER | CYTOCHROME P450 71B11-RELATED | 16 | 496 | - | - | |
| Glsi07g1246 | 499 | Pfam | Cytochrome P450 | 33 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | CDD | CYP71-like | 62 | 491 | - | - | |
| Glsi07g1246 | 499 | FunFam | Cytochrome P450 83B1 | 19 | 494 | - | - | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 441 | 464 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 60 | 79 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 84 | 105 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 354 | 372 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 395 | 419 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi07g1246 | 499 | PRINTS | E-class P450 group I signature | 431 | 441 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi07g1246 | Glsi-ChrGlsi07 | 19566350 | 19567951 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi07g1246 | 25 | 498 | Cytochrome P450 | AT4G31500 | 49.895 | 4.48e-172 | 492 |