Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1245 ATGTCCGCTTCATCCACTTCTTCCTTTTCACCGGACCAGCACTTCTCTCCCTCCGACCAGCTCTGCTATGTTCATTGCAACTTCTGTGACACTGTCCTCGCGGTGAGTGTTCCTTGCACCAGTTTGTTCAAGACAGTCACAGTGAGATGTGGCCACTGCACCAACCTTTTGTCTGTGAATATGCGTGGGCTGCTTCTTCCTGCACCTACCAATCAGCTTCACCTTGGCCACTCCTTCTTCACTCCTCAAAATCTGCTGGAGGAGATTCGAAGTGCTTCTTCATCAAACATGCTGGTAAATCAGATGCAGAACCCAAATGATTCCTTTATGATGAATACCCTGCGAGGAGGACCTGAGGAAATCCCTAAACCTCCACCAGCTAACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAACCGCTTCATCAAGGACGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCCTTTAGTGCTGCGGCAAAGAATTGGGCCCATTTTCCACACATCCATTTCGGACTGATGCCTGATCACCAACCCGTGAAGAAAGCTAGTGTACGCCAGGAAGGAGAGGATATGCTTATGAAAGATGGGTTTTTTGCTCCTGCAAATGTGGGTGTCTCTCCCTATTAG 657 0.4871 MSASSTSSFSPDQHFSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAPTNQLHLGHSFFTPQNLLEEIRSASSSNMLVNQMQNPNDSFMMNTLRGGPEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKASVRQEGEDMLMKDGFFAPANVGVSPY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1245 218 MobiDBLite consensus disorder prediction 115 137 - -
Glsi07g1245 218 Pfam YABBY protein 17 182 IPR006780 GO:0007275
Glsi07g1245 218 PANTHER PROTEIN YABBY 6-RELATED 5 194 IPR006780 GO:0007275
Glsi07g1245 218 FunFam Axial regulator YABBY 127 199 - -
Glsi07g1245 218 CDD HMG-box_SF 136 172 - -
Glsi07g1245 218 SUPERFAMILY HMG-box 127 176 IPR036910 -
Glsi07g1245 218 Gene3D High mobility group box domain 122 178 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1245 Glsi-ChrGlsi07 19476519 19479838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1245 28 216 C2C2-YABBY Transcription Factor Family AT4G00180 63.333 1.66e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Glsi07g1245 YABBY 5.1e-74 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g1245 07 19476519 19479838 Glsi07g1245 07 19476519 19479838 ECH