Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1229 ATGAAGAAGATTAGGGGATTCAAGCTTGGGAGACGCCTCGTCCGAATTTCCAGATGGATCCTCCGGAAAACCTGGACCCGACCAGGATACCAGCGCCTGGGTTCGTCTGAGTCTCCGGCGACGAAGACCATCGCGAAACTTCTCACATGGGGCCGCAAGTTGACGAAGGGAGCCAGATCCCTCTGCGGCGCGAAGTCCGGGCCGAGTTATATTCCGATCGGATCCGACCCAGTTCAGGCTAAACAACCAGCGGTGCCGAAAGGGCACTTAGCAGTTTATGTTGGGAAGAATGACGGCCAAGGCGAGTTCCACCGGGTGTTGGTTCCTGTGATTTATTTCAACCACCCCTTGTTCGGAGAGTTGCTGAGAGAAGCGGAGAAGGAGTACGGGTTTCAGCACCCGGGTGGGATCACGATTCCTTGCCGGTTCACGGAGTTTGAACGTGTGAAAACCCGAATAGCAGCTGGGTCGGGCGGCGGTGGCCGGAGATTGGCGTGGAGGCAGCAGTACTATTGA 516 0.5659 MKKIRGFKLGRRLVRISRWILRKTWTRPGYQRLGSSESPATKTIAKLLTWGRKLTKGARSLCGAKSGPSYIPIGSDPVQAKQPAVPKGHLAVYVGKNDGQGEFHRVLVPVIYFNHPLFGELLREAEKEYGFQHPGGITIPCRFTEFERVKTRIAAGSGGGGRRLAWRQQYY 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1229 171 Pfam Auxin responsive protein 69 150 IPR003676 GO:0009733
Glsi07g1229 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 65 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1229 Glsi-ChrGlsi07 18781225 18781740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1229 83 146 Calmodulin-binding Proteins AT3G43120 50.000 6.56e-16 69.3