Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1215 ATGTTTAAAGCTCAAAAAGAGCACACCATCCATAGACTCAACAAAACCCTAGACCCCAACACCAAGTGCACCCAAACCGATACCCAAACATGGCTCAGCTCCGCTCTCACAAATCTTGAGGCATGCAAAGCTGGATTTTATGAACTTGGGGTTCAAGACTATGTGCTGCCCTTGATGTCCAACAAAGTCACTAACTTGCTAACAAATACTTTGGCTCTAAACAAGGTTCAATATCAAGAACCAACTTATAAAGATGGGTTCCCTACATGGGTCAGACCCGGGGATAGGAAGCTATTGCAGAGTTCTTCTCCATCTTCTCGGGCTAATATTGTGGTGGCTAAAGATGGGTCTGGCCACTATACAACAGTGAGTGCTGCCATAAATGCTGCACCAAAAAGCAGTGGAAGGTATGTTATATACGTAAAGGAAGGAATATACAATGAACAAGTGGAGATAAAGCTGAACAACATCATGTTGGTGGGAGATGGTATTGGAAAGACTATTATTACGGGTAGCAATAGCGTTGGAGGGGGCACCACTACCTTCCGTTCTGCAACTGTTGGTCATGTTGTTGGGGATGGGTTTATTGCTCAAGACATCACATTCAGGAACACTGCTGGTGCATCTAACCAACAAGCTGTAGCATTGCGTTCTGGGTCAGACTTATCAGTATTCTACAGATGTGGTTTTGAAGGTTTCCAGGACACATTGTATGTGTTCTCTGAGAGACAATTCTATAGGGAATGTGATGTTTATGGCACAGTTGACATCATCTTTGGTAATGCTGCTGTAGTTTTCCAGAATTGCAACCTTTTTGCCAGAAATCCTCCTAACAAAGTCAACACAATCACTGCCCAAGGTTGA 864 0.434 MFKAQKEHTIHRLNKTLDPNTKCTQTDTQTWLSSALTNLEACKAGFYELGVQDYVLPLMSNKVTNLLTNTLALNKVQYQEPTYKDGFPTWVRPGDRKLLQSSSPSSRANIVVAKDGSGHYTTVSAAINAAPKSSGRYVIYVKEGIYNEQVEIKLNNIMLVGDGIGKTIITGSNSVGGGTTTFRSATVGHVVGDGFIAQDITFRNTAGASNQQAVALRSGSDLSVFYRCGFEGFQDTLYVFSERQFYRECDVYGTVDIIFGNAAVVFQNCNLFARNPPNKVNTITAQG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1215 287 FunFam Putative pectinesterase 57 106 287 - -
Glsi07g1215 287 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 7 76 IPR035513 -
Glsi07g1215 287 ProSitePatterns Pectinesterase signature 1. 133 152 IPR018040 -
Glsi07g1215 287 Pfam Pectinesterase 109 287 IPR000070 GO:0030599|GO:0042545
Glsi07g1215 287 Gene3D - 104 287 IPR012334 -
Glsi07g1215 287 PANTHER PECTINESTERASE 8 287 - -
Glsi07g1215 287 Pfam Plant invertase/pectin methylesterase inhibitor 9 73 IPR006501 GO:0004857
Glsi07g1215 287 ProSitePatterns Pectinesterase signature 2. 251 260 IPR033131 -
Glsi07g1215 287 Gene3D Invertase/pectin methylesterase inhibitor family protein 4 76 IPR035513 -
Glsi07g1215 287 SUPERFAMILY Pectin lyase-like 104 287 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1215 Glsi-ChrGlsi07 18541432 18547634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1215 7 287 Carbohydrate Esterase AT2G45220 70.567 4.06e-142 408