Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1208 ATGCTCAAACATGGCTCAACGCAGCTCTCACCAACCTTGAGACGTGCCAAGCTAGGTTTTATGAGCTTGGGGTACAAACAAGACTATGTGTTGCCTCTGATGTCCAACAATGTTACCAAGTTGCTAAGCGACCCCTTGGCTCTAACCAAGGCGTCGTCTTCAGCTTTTCGCGCTAACGTTGTGGTGGCTAAAGATGGGTCCGGCAAGTTCACAACCTTGAGTGCTGCCATAAATGATGCATCAAATAGTGGTAGTGGGAGGTACGTGATATGTGTGAAGGCGGGAATTTACAATGAACAGGTCGAGATAAAGGCAAAGAATATCATGTTAGTGGGAGATGGTATTGGGAAGAATATAATCACTCGTAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGATCAGCCACTATTGCTGTTGCAGTAGATGGGTTTATTGCTCAAGACATCACATTTAGAAACACTTCTGGAGCATCGAATCACCAAGCCGTGGTACTGCGTTTTAGGTCAGATTTGTCAGTATTTTACAGATGCAGCTTTGAAGGTTACCAAGACACATTTTTGATCAACCAGGCTGGTTGGTTGGAATGGAGTGGTAACTTCGCCTTAAACACTTTGTATTATGGAGAGTATTTGAATACAGGTCCAGGCTCTTCAACAGCAAATCGGGTTAAGTGGTCTTACCATGTTATCACAAGTGCTTCCGAAGCCTCAAAATTCACTGTTTCTAATTTTATCTCCGGGAGCTCATGGTTGCCAGCCACTAGGGTGCCTTTCACCTCTGGTTTATAA 792 0.4482 MLKHGSTQLSPTLRRAKLGFMSLGYKQDYVLPLMSNNVTKLLSDPLALTKASSSAFRANVVVAKDGSGKFTTLSAAINDASNSGSGRYVICVKAGIYNEQVEIKAKNIMLVGDGIGKNIITRSKSVGGGTTTFRSATIAVAVDGFIAQDITFRNTSGASNHQAVVLRFRSDLSVFYRCSFEGYQDTFLINQAGWLEWSGNFALNTLYYGEYLNTGPGSSTANRVKWSYHVITSASEASKFTVSNFISGSSWLPATRVPFTSGL 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1208 263 SUPERFAMILY Pectin lyase-like 53 262 IPR011050 -
Glsi07g1208 263 PANTHER PECTINESTERASE 188 253 - -
Glsi07g1208 263 Pfam Pectinesterase 59 188 IPR000070 GO:0030599|GO:0042545
Glsi07g1208 263 Gene3D - 190 263 IPR012334 -
Glsi07g1208 263 Gene3D - 53 189 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi07g1208 Glsi-ChrGlsi07 18445237 18446528 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1208 173 263 Carbohydrate Esterase AT2G45220 56.522 3.43e-26 105