Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1204 ATGCTCAAACATGGCTCAGCACAGCTCTCACAAACCTTGAGACGTGCCAAGCTGGGTTTTATGAGCTTGGGGTACAATGTGTTGCCCCCGATGTCCAACAATGTTACCAAGTTGCTAAGCAACACTTTGGCTCTAAACAAGGTCGAATATCAAGAACCAAGTTATAAAGATGGGTTCCCAACATGGGTTAAGCCCGGTGATAGGAAGTTGTTGCATCCAGCTTCTCGCGCTAACGTTGTGGTGGCTAAAGATGGGTCTAGCAAGTTCACAACTTTGAGTGCTGCCATAAATGCTGCACCAAAGAGTGTGGGAGATGGTATTGGGAAGACTATAATCACTGGTAGCAAAAGTGTTGGAGGAGGCACCAAAACCTTCCGGTCATTCACTGTTGCTGTTGCAGGAGATGAGTTTATTGCTCAAGACATCACATTTAGAAACACTGCTGGAGCATCGAATCACCAAGCCGTGGCACTGCGTTCTGGGTTAGATTTGTCAGTATTTTACAGATGCAGCTTTGAAGGTTACCAAGACACATTAAACCCTCCTAACAAAGTCAATACAATCACAGCCCAAGGTCGAACTGATCCAAATCAAAACACTGGTATCTCCATTCACAATTCTAGAGTTACAGCTGTCTCTGATCTTCAACCAGTCCAAAGCTCTGTGAAGACCTATCTTGGAAGGCCATGGCAACAATATTCGCAAACAGCATTTATGAAGACATTTCTTGATAGTTTGATCAACCAGTCTGGTTGGTTGGAATGGAGTGGTAACTTCGCCTTAAACACTTTGTATTACGGAGAGTATTTGAATACAGGACCATGCTCTTCAACAGAAAATCGGGTTAAGTGGTCAGGTTACCATGTTATCGCCAGTGCTTCCGAAGCTTCAAAATTCACTGTTTCTAATTTCATCTCCGGGAGCTCATGGTTGCCAGCCACTAGGGTGCCTTTCACCTCTGGTTTATAA 969 0.4438 MLKHGSAQLSQTLRRAKLGFMSLGYNVLPPMSNNVTKLLSNTLALNKVEYQEPSYKDGFPTWVKPGDRKLLHPASRANVVVAKDGSSKFTTLSAAINAAPKSVGDGIGKTIITGSKSVGGGTKTFRSFTVAVAGDEFIAQDITFRNTAGASNHQAVALRSGLDLSVFYRCSFEGYQDTLNPPNKVNTITAQGRTDPNQNTGISIHNSRVTAVSDLQPVQSSVKTYLGRPWQQYSQTAFMKTFLDSLINQSGWLEWSGNFALNTLYYGEYLNTGPCSSTENRVKWSGYHVIASASEASKFTVSNFISGSSWLPATRVPFTSGL 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1204 322 Gene3D - 183 322 IPR012334 -
Glsi07g1204 322 PANTHER PECTINESTERASE 182 312 - -
Glsi07g1204 322 Pfam Pectinesterase 103 179 IPR000070 GO:0030599|GO:0042545
Glsi07g1204 322 Pfam Pectinesterase 183 307 IPR000070 GO:0030599|GO:0042545
Glsi07g1204 322 Gene3D - 75 182 IPR012334 -
Glsi07g1204 322 SUPERFAMILY Pectin lyase-like 73 321 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi07g1204 Glsi-ChrGlsi07 18356418 18361317 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1204 13 322 Carbohydrate Esterase AT2G45220 57.713 7.93e-136 393