Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1198 ATGGCACAACTCAACCTCTCATTGCTAGTCATCTTCCTCTCTCTCTTCTCAAGTTTGGCATTAACTGAGCCATCCTTGACCAGACCTAGCCATAATCCCCAGACCATGGCCTACGTAAAGGCCTCTTGCCGAACCACTCGCTACCCAGATCTATGCCTTCTCTGCTTAGCCAGATTTGCCAATAGTTCCACAATACAAAGCCCCCAACAATTAGTCCATGTGGCCTTATCTGTGAGCCTCTCAAGAGCCCTAGACACAAAAGCGTACTTGCTGAAAGTGGCCAAGGAATTCAAGGCACTGAAGAACAATAGAGAGTACCTAATTGTGCAAGATTGCTTGAGGCAAATCAACGACAGTGTCGACCAGCTCAGCCTCTCCATCAAAGAGCTCCGCCGGTTGAACCGGAAAGGCACCAGCACCGCCATCGACGACGATTTCTTGTGGCATATAAGTAATGTTGAGACATGGGTCAGCACTGCCCTAACTGATGCTAGCACTTGTGTGGATTCATTCCCGGGTCGTAGAATGAGTAAAATGAAGGCTGCTATTAAGGTTAAGGCCTTAAATGTTGCACAAGTCACTAGCATCGCCCTTGCACTATTTCATAGATATGCAACTAGGTACCGAGCAGCAGCTAGAACCATCAAGAAACCCTAA 657 0.4764 MAQLNLSLLVIFLSLFSSLALTEPSLTRPSHNPQTMAYVKASCRTTRYPDLCLLCLARFANSSTIQSPQQLVHVALSVSLSRALDTKAYLLKVAKEFKALKNNREYLIVQDCLRQINDSVDQLSLSIKELRRLNRKGTSTAIDDDFLWHISNVETWVSTALTDASTCVDSFPGRRMSKMKAAIKVKALNVAQVTSIALALFHRYATRYRAAARTIKKP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1198 218 Coils Coil 113 133 - -
Glsi07g1198 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 203 IPR035513 -
Glsi07g1198 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 204 IPR035513 -
Glsi07g1198 218 Pfam Plant invertase/pectin methylesterase inhibitor 38 200 IPR006501 GO:0004857
Glsi07g1198 218 SMART PMEI_2 34 200 IPR006501 GO:0004857
Glsi07g1198 218 CDD PMEI-like_3 41 206 - -
Glsi07g1198 218 NCBIfam pectinesterase inhibitor domain 8 204 IPR006501 GO:0004857
Glsi07g1198 218 FunFam Pectinesterase inhibitor 3 34 205 - -
Glsi07g1198 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1198 Glsi-ChrGlsi07 18302049 18302705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1198 33 200 Carbohydrate Esterase AT3G14310 25.444 2.03e-12 63.9