Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1175 ATGAAGGAACTTTCAGTCTTGTATGGACACGTACTCTGTATAGAAATTTTGGCTTTAAAGAGAGCTCTTGCTAGATTAGAAGAGGAAAAGGAAACTGGCTTGCTTCAATATCAGCAAAGTTTGGAAAGATTGTCTAATCTAGAGGCAGAAGTGTCTTGTGCACAAGAAAATTCCTGGGGACTTGATGAACGAGCAAGCAAGGCCGAAGCTGAAGTTCAAGCCTTGAAAGAGTCTCTTATTAAATTAGAGGCTGAAAGACTCCTTGATCCTGATTCCTCAAATCAAACCCTACTTGTTGGTACCTATGGTTATGTTGCCCCAGAACTTGCATACACAATGAGGGTGACTGAAAAATGTGATGTCTATAGTTTCGGAGTGGTGGCATTAGAAACAATAATGGGGAGACATCCTGGAGAGTTGATCTCATCTTTGGCAAAGACTTGTCCTCATAACATATTGTTGAAAGATATCTTAGACTCACGTCTCCCTCTTCCCTTGTCAAAAGATGCGCAAGACGTGATTCTCTTAGTCACAACAGCACTAGCATGCTTGCATCCCACACCAAAGTCTCGACCATCAATGCAGAAAGTGACCAAAGAACTTTCATTTTCCAAGATGCCTTTGCATGTTCAATTTAATGATATTTCACTCCAGCAGTTGATTGCTCAAGATATATATTCTGTAGACAAAAGCTAG 696 0.4052 MKELSVLYGHVLCIEILALKRALARLEEEKETGLLQYQQSLERLSNLEAEVSCAQENSWGLDERASKAEAEVQALKESLIKLEAERLLDPDSSNQTLLVGTYGYVAPELAYTMRVTEKCDVYSFGVVALETIMGRHPGELISSLAKTCPHNILLKDILDSRLPLPLSKDAQDVILLVTTALACLHPTPKSRPSMQKVTKELSFSKMPLHVQFNDISLQQLIAQDIYSVDKS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1175 231 Coils Coil 65 85 - -
Glsi07g1175 231 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1175 231 Gene3D Transferase(Phosphotransferase) domain 1 74 215 - -
Glsi07g1175 231 Coils Coil 16 57 - -
Glsi07g1175 231 PANTHER LEUCINE RICH REPEAT KINASE 2 84 205 - -
Glsi07g1175 231 Pfam Protein kinase domain 95 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1175 231 SUPERFAMILY Protein kinase-like (PK-like) 88 215 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1175 Glsi-ChrGlsi07 17547555 17557382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1175 93 201 Receptor kinase-like Gene Family AT5G49660 38.462 1.15e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g1175 Pkinase 6.9e-09 CL0016