Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1165 ATGAAAGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGCATTAGAAACAATAATGGGGAGATATCCTGGAGAATTGATCTCATCTTTGGCAAAGACACATTGTACTCATAACATACTGTTGAAAGATATCTTAGACTCACGTCTCCCTCTTCCCTTGTCAAAAGATGCGCAAGATGTGATTCTCTTAGTCATAGCAGCACTAGCATGCTTGCGTCCCACACCAAAGTCTCGACCATCAATGCAGAAAGTGACTAGAGAACTTTCATTTTCCAAGATGCCTTCGCATGTTCAATTTAATGATATTTCACTTCAGCAGTTGATTGCTCAAGATATATATTCTGTAGACAAAAGCTAG 363 0.3857 MKVTEKCDVYSFGVVALETIMGRYPGELISSLAKTHCTHNILLKDILDSRLPLPLSKDAQDVILLVIAALACLRPTPKSRPSMQKVTRELSFSKMPSHVQFNDISLQQLIAQDIYSVDKS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1165 120 SUPERFAMILY Protein kinase-like (PK-like) 2 104 IPR011009 -
Glsi07g1165 120 Pfam Protein tyrosine and serine/threonine kinase 2 90 IPR001245 GO:0004672|GO:0006468
Glsi07g1165 120 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Glsi07g1165 120 PANTHER LEUCINE RICH REPEAT KINASE 2 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1165 Glsi-ChrGlsi07 17273842 17274204 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1165 1 86 Receptor kinase-like Gene Family AT4G28490 39.560 3.94e-10 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g1165 PK_Tyr_Ser-Thr 2.7e-05 CL0016