Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1163 ATGATGTTGACTGAAATCCGACATCGCAATATTGTGAAACTTCATGGTTATTGTTTACACAATCAATGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTCTTTTATGTCTTGAGTAACGATGCTGAAGCGGAAGAGTTGAATTGGACCACAAGGGTGAACCTTGTTAAAGGAATAGCATCAGCATTGTTTTACATGCATCATGATTGTAGTCCGGCAATTATTCATCGAGACATAACAAGTAGCAATATTTTGTTGAACTCAAAATTGGAAGCTTTTGTCTCAGACTTTGGCACAGCTAGACTCATTGATCCTGATTCCTCGAATCAAACCCTACTTGTTGGTACCTATGGTTATGTTGCTCCAGAACTTGCATACACAATGAAGGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGCATTAGAAACAATAATGGGGAGACATCCTGGAGAGTTGATCTCATCTTTGGAAAAGACTTGTACTCATAACATATTGTTGAAAGATATCTTAGACTCACGTCTCCCTCTTCCCTTGTCAAAAGATGCGCAAGATGTGATTCTCTTAGTCACAACAGCACTAGCATGCTTGCGTCCCACACCAAAGTCTCGACCATCAATGCAGAAAGTGACCAAAGAACTTTCATTTTCCAAGATGCCTTTGCATGTTCAATTTAATGATATTTCACTCCAGCAATTGATTGCTCAAGATATATATTCTGAAGACAAAAGCTAG 747 0.3855 MMLTEIRHRNIVKLHGYCLHNQCMFLIYEYMERGSLFYVLSNDAEAEELNWTTRVNLVKGIASALFYMHHDCSPAIIHRDITSSNILLNSKLEAFVSDFGTARLIDPDSSNQTLLVGTYGYVAPELAYTMKVTEKCDVYSFGVVALETIMGRHPGELISSLEKTCTHNILLKDILDSRLPLPLSKDAQDVILLVTTALACLRPTPKSRPSMQKVTKELSFSKMPLHVQFNDISLQQLIAQDIYSEDKS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1163 248 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Glsi07g1163 248 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1163 248 Pfam Protein kinase domain 2 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1163 248 FunFam MDIS1-interacting receptor like kinase 2 31 224 - -
Glsi07g1163 248 ProSitePatterns Tyrosine protein kinases specific active-site signature. 76 88 IPR008266 GO:0004672|GO:0006468
Glsi07g1163 248 PIRSF ILK 1 230 - -
Glsi07g1163 248 PANTHER LEUCINE RICH REPEAT KINASE 2 2 222 - -
Glsi07g1163 248 SUPERFAMILY Protein kinase-like (PK-like) 2 222 IPR011009 -
Glsi07g1163 248 Gene3D Transferase(Phosphotransferase) domain 1 35 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1163 Glsi-ChrGlsi07 17192801 17193647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1163 3 124 Receptor kinase-like Gene Family AT4G08850 66.393 2.79e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g1163 Pkinase 7.8e-35 CL0016