Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1160 ATGGTACGACTCATTGATCCTGATTCCTCAAATCAAACCCTACTTGTTGGTACCTATGGTTATGTTGCTCCAGAACTTGCATACACAATGAAGGTGACTGAAAAATGTGATGTTTATAGTTTCGGGGTGGTGGCATTAGAAACAATAATGGGGAGACATCCTGGAGAGTTGATATCATCTTTGGTAAAGACTTGTACTCATAACATATTGTTGAAAGATATCTTAGACTCGCGTCTCCCTCTTCCCTTGTCAAAAGATGCGCAAGATGTGATTCTCTTAGTCATAATAGCACTAGCATGCTTGCGTCCCACACCAAAGTCTCGACCATCAATGCAAAAAGTGACTAAAGAACTTTCATTTTCCAAGATGCCTTCGCATGTTCAATTTAATGATATTTCACTTCAGCAGTTGATTGCTCAAGATATATATTCTGTAGACAAAAGCTAG 447 0.3893 MVRLIDPDSSNQTLLVGTYGYVAPELAYTMKVTEKCDVYSFGVVALETIMGRHPGELISSLVKTCTHNILLKDILDSRLPLPLSKDAQDVILLVIIALACLRPTPKSRPSMQKVTKELSFSKMPSHVQFNDISLQQLIAQDIYSVDKS 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1160 148 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
Glsi07g1160 148 PANTHER LEUCINE RICH REPEAT KINASE 2 2 122 - -
Glsi07g1160 148 Pfam Protein kinase domain 10 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1160 148 SUPERFAMILY Protein kinase-like (PK-like) 3 132 IPR011009 -
Glsi07g1160 148 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1160 Glsi-ChrGlsi07 17089084 17092632 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1160 10 118 Receptor kinase-like Gene Family AT5G49660 41.739 5.08e-18 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g1160 Pkinase 8.8e-10 CL0016