Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1152 ATGGTAGAACTTGCATACACAATGAGGGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGTTTTAGAAACAATAATGGGGAGACATCCTGGAGAGTTGATCTCATCTTTGACAAAGACTTGTACTCATAACATAATGTTGAAAGATATCTTAGACTCACGTCTCCCTCTTCCCTTGCGAAAAGATGCACAAGATGTGATTCTCTTAGTCACAACAGCATTAGCATGCTTGCATCCCACGCCAAAATCTCGACCATCAATGCAACAAGTGAGTAAAGAGCTTTCATTTTCCAAGATGCCGTTGCATGTTCAATTTAATGATATTTCACTCCAGCAGTTGATTGCTCAAAATATATATTTTCTCGAGAAAAGCTAG 381 0.3832 MVELAYTMRVTEKCDVYSFGVVVLETIMGRHPGELISSLTKTCTHNIMLKDILDSRLPLPLRKDAQDVILLVTTALACLHPTPKSRPSMQQVSKELSFSKMPLHVQFNDISLQQLIAQNIYFLEKS 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1152 126 Pfam Protein tyrosine and serine/threonine kinase 3 96 IPR001245 GO:0004672|GO:0006468
Glsi07g1152 126 SUPERFAMILY Protein kinase-like (PK-like) 3 110 IPR011009 -
Glsi07g1152 126 PANTHER LEUCINE RICH REPEAT KINASE 2 3 100 - -
Glsi07g1152 126 Gene3D Transferase(Phosphotransferase) domain 1 2 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1152 Glsi-ChrGlsi07 16839644 16840024 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1152 3 92 Receptor kinase-like Gene Family AT4G28490 37.500 9.35e-13 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g1152 PK_Tyr_Ser-Thr 3e-07 CL0016