Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1150 ATGTTGACTAAAATTCGACAGCGCAACATTGTGAAACTTCATGGTTATTGTATACACAATCAATGCATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTCTTTTATGTCTTGAGTAACGATGATGAAGCTGAAGAGTTGAATTGGACCACAAGGGTGAACCTTGTTAAAGGAATAGCATCAGCATTGTTTTACATGCATCATGATTGTAGTCCGGCAATTATTCATCGAGACATAACAAGTAGCAATATTTTGTTGAACTCAAAATTGGAAACTTTTGTCTCAGACTTTGGCACAGCTAGACTCATTGATCCTGATTCCTCAAATCAAACCCTACTTGTTGGTACCTATGGTTATGTTGCTCCAGAACTTGCATACACAATGAAGGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGCATTAGAAACAATAATGGGAAGACATCCTGGAGAGTTGATCTCATCTTTGGCAAAGACTTGTACTCATAACATATTGTTGAAAGATATCTTAGACTCACGTGGAAGCAATGTGGAAGTAGCAAATAATATAATCGATCCAACTTGA 576 0.3698 MLTKIRQRNIVKLHGYCIHNQCMFLIYEYMERGSLFYVLSNDDEAEELNWTTRVNLVKGIASALFYMHHDCSPAIIHRDITSSNILLNSKLETFVSDFGTARLIDPDSSNQTLLVGTYGYVAPELAYTMKVTEKCDVYSFGVVALETIMGRHPGELISSLAKTCTHNILLKDILDSRGSNVEVANNIIDPT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1150 191 SUPERFAMILY Protein kinase-like (PK-like) 2 159 IPR011009 -
Glsi07g1150 191 ProSitePatterns Tyrosine protein kinases specific active-site signature. 75 87 IPR008266 GO:0004672|GO:0006468
Glsi07g1150 191 Pfam Protein kinase domain 2 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1150 191 Gene3D Transferase(Phosphotransferase) domain 1 1 181 - -
Glsi07g1150 191 FunFam Os07g0541700 protein 30 117 - -
Glsi07g1150 191 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1150 191 PANTHER LEUCINE RICH REPEAT KINASE 2 2 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1150 Glsi-ChrGlsi07 16800868 16804133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1150 2 123 Receptor kinase-like Gene Family AT4G08850 64.754 1.92e-51 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g1150 Pkinase 2.3e-31 CL0016