Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1145 ATGTTTCTCATCTATGAATACATGGAAAGAGGAAGCCTCTTTTATGTCTTGAGTAATGATGCTGAAGCTGAAGAGTTGAATTGGACCACAAGGGTGAACCTTGTTAAAGGAATAGCATCAGCATTGTTTTACATGCATCATGATTGTAGTCCAGCAATTATTCATCGAGACATAACAAGTAGCAATATTTTGTTGAACTCAAAATTGGAAGCTTTTGTCTCAGACTTTGGCACAGCTAGACTCATTGATCCTGATTCCTCAAATCAAACCCTCCTTGTTGGTACCTATGGTTATGTTGCCCCAGAACTTGCATACACAATGAGGGTGACTGAAAAATGTGATGTTTATAGTTTTGGAGTGGTGGTTTTAGAAACAATAATGGGGAGACATCCTGGAGAGTTGATCTCATCTTTGACAAAGACTTGTACTCATAACATAATGTTGAAAGATATCTTAGACTCACGTCTCCCTCTTCCCTTGCGAAAAGATGCACAAGATGTGATTCTCTTAGTCACAACAGCATTAGCATGCTTGCATCCCACGCCAAATTCTCGACCATCAATGCAACAAGTGAGTAAAGAGCTTTTATTTTCCAAGATGCCTGTGCATGTTCCATTTAATGAATATTCACTCCAGCAGTTGATTGCTCAGAATATATATTTCCTAGACAAAAGCTAG 678 0.3864 MFLIYEYMERGSLFYVLSNDAEAEELNWTTRVNLVKGIASALFYMHHDCSPAIIHRDITSSNILLNSKLEAFVSDFGTARLIDPDSSNQTLLVGTYGYVAPELAYTMRVTEKCDVYSFGVVVLETIMGRHPGELISSLTKTCTHNIMLKDILDSRLPLPLRKDAQDVILLVTTALACLHPTPNSRPSMQQVSKELLFSKMPVHVPFNEYSLQQLIAQNIYFLDKS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1145 225 Pfam Protein kinase domain 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1145 225 FunFam MDIS1-interacting receptor like kinase 2 8 201 - -
Glsi07g1145 225 PIRSF ILK 1 205 - -
Glsi07g1145 225 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1145 225 PANTHER LEUCINE RICH REPEAT KINASE 2 1 198 - -
Glsi07g1145 225 SUPERFAMILY Protein kinase-like (PK-like) 2 199 IPR011009 -
Glsi07g1145 225 ProSitePatterns Tyrosine protein kinases specific active-site signature. 53 65 IPR008266 GO:0004672|GO:0006468
Glsi07g1145 225 Gene3D Transferase(Phosphotransferase) domain 1 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1145 Glsi-ChrGlsi07 16632653 16633431 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1145 2 191 Receptor kinase-like Gene Family AT2G35620 42.000 2.82e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g1145 Pkinase 1.9e-29 CL0016