Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1087 ATGGACAGTGAAGCAAACATTGGTGGAGGAGGAGGTGATAAAAGAGTTGGCCCTTGCGGAGCCTGCAAGTTTCTGAGGAGAAAGTGCGTGAAAGGCTGCATATTTGCGCCTTATTTTGACTCTGACGAAGGGACGGCTCATTTTAGTGCGGTGCACAAGGTGTTTGGTGCTAGCAATGCCTCCAAGCTGCTCTTGGGAATCCCGGCTCATGAGCGTCTTGCCGCTGTGGTTACTCTCTGCTATGAGGCTCTGGCTAGGGCTAGAGATCCTGTTTATGGCTGTGTTGCCCACATCTTTGCCCTTCAACAGCAGATAGCGAACTTGCAGGCAGAGTTGGCTAATGTTCAAAGCCGTCTTTCCACATTGCAAGCCCCACCACTTGCACAGCTTCAAAGCTCTTCACCCACAAGTTTGTATTCCTTCTCCGACATGGCATCATCCACTGACTTGCATAGTAACTCCGGCGTATCCACGAGCCTTGAACATCTTCAAGCTTTTCCCATATCAGTAGAATTAAGCAGCTTTCTCAATATCTCGGATCAACATCTCGACAACGGCAACCTGCAAGATTTGGCTCAAGAACTTGTCTCTAGGTACTTGGCCGGAGCAAGATTCCGGCCAGCAAATTCTAACTAA 636 0.4921 MDSEANIGGGGGDKRVGPCGACKFLRRKCVKGCIFAPYFDSDEGTAHFSAVHKVFGASNASKLLLGIPAHERLAAVVTLCYEALARARDPVYGCVAHIFALQQQIANLQAELANVQSRLSTLQAPPLAQLQSSSPTSLYSFSDMASSTDLHSNSGVSTSLEHLQAFPISVELSSFLNISDQHLDNGNLQDLAQELVSRYLAGARFRPANSN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1087 211 Coils Coil 98 118 - -
Glsi07g1087 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 17 149 - -
Glsi07g1087 211 Pfam Lateral organ boundaries (LOB) domain 18 116 IPR004883 -
Glsi07g1087 211 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1087 Glsi-ChrGlsi07 14742130 14748249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1087 17 209 AS2 family AT4G00210 54.067 2.38e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi07g1087 LOB 3.6e-36 No_clan