Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1086 ATGAGTGCAAACTGTAGCAGTAGCGGTGGCGGCGGTGGCGGAAGTACTGGTGGAGGAGGAGGAGGTGGCCCGTGCGGCGCGTGCAAATTCTTGCGCCGGAAGTGCGTGGTGGAGTGTATCTTCGCGCCGTACTTTGACTCGGAGCAAGGAGCGACTCATTTTGCGGCGGTGCACAAGGTCTTCGGAGCCAGCAATGTGTCGAAGCTGCTTCTCAATATTCCAGTGCACAAGAGGCTTGAAGCTGTGGTCACCATTTGTTACGAAGCTCAGGCTCGGCTCAGAGATCCTGTCTATGGCTGCGTCGCACACATCTCAGCGCTTCAGCAGCAGGTAGTGAGTTTGCAAGCTGAACTCTCCTACCTACAAAGCCACCTTGCCGCATTAGAATTACCTCAACCACAATTCCCTCCTCCGCCGCAAGCGGCAATGGCACCGCCGATGATCTCATTGACTGACCTCCCGTGCCCCTCCGTCTTTGCATCCACGTATGATTTATCTTCACTTTTCGATCCCATGGCTCAAAATACATGGGCCGTGCAGCAACGGCCTGTCGGCGCACGACAATATTTGGGCAGTGGCCCATCGTCAGCCGAGAGCGTTGATGGTGGCGGTGATCTTCAAGCATTGGCACGTGAGCTTTTGGATAGGCACGGGTCTCCACCCGCAGTTCCGTTGCCGTGTTCTATTGCCTCATTATCTCCTTCACTTTCTAAATGA 717 0.5509 MSANCSSSGGGGGGSTGGGGGGGPCGACKFLRRKCVVECIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLEAVVTICYEAQARLRDPVYGCVAHISALQQQVVSLQAELSYLQSHLAALELPQPQFPPPPQAAMAPPMISLTDLPCPSVFASTYDLSSLFDPMAQNTWAVQQRPVGARQYLGSGPSSAESVDGGGDLQALARELLDRHGSPPAVPLPCSIASLSPSLSK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1086 238 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Glsi07g1086 238 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 134 - -
Glsi07g1086 238 MobiDBLite consensus disorder prediction 1 20 - -
Glsi07g1086 238 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1086 Glsi-ChrGlsi07 14724617 14729394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1086 25 238 AS2 family AT4G00220 62.326 1.13e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi07g1086 LOB 1.3e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1053 06 14187007 14192950 Glsi07g1086 07 14724617 14729394 CCT