Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1083 ATGGATCCAGTAGCTGCACAAGGGCGTCCTCTCCCACCTCCTTTTCTTAGTAGAGATCTTCATCTCCACTCCCACCACCAATTCCAGCAGCCCCACCACAATCACCAAAACAATGAAGATCATGAACAAAACGGCAATAATGGCAGCATAAACCGCAGCCAGAAGCGAGATCGCGATGAAAACACAACCGCCGCCACGGAGGACGGCAAAGAATTCGGCCAAGGAGGAGAGGGTGAGATCACTAGAAGACCTCGTGGTAGACCTGCTGGCTCCAAGAATAAGCCCAAGCCTCCTATCATAATAACCCGAGATAGTGCCAATGCTCTCCGATCCCACGTCGTCGAAGTTGCGAACGGCTGCGATATCATGGAGAGCATCTCCACCTTTGCGCGGCGGAGACAGCGTGGGGTTTGCATTCTGAGTGGAAGTGGGACAGTCACTAATGTTACTCTGAAACAACCAGCTTCGCCTGGTGCAGTACTGACCTTACATGGGAGATTTGAGATTTTATCTTTATCTGGCTCGTTCCTGCCACCTCCGGCTCCGCCTACGGCTTCCGGGTTGGCTATATACTTGGCTGGAGGTCAAGGTCAGGTGGTCGGAGGCATCGTGGTAGGTCCGTTATTGGCGTCTGGTCCAGTGGTTATTATGGCTGCTTCTTTCGGAAATGCGGCGTATGAGAGACTGCCGTTGGAGGAGGAGGAGGCAGCGGTGGCGGTTCCGGGGAGTGGCGAGTTAGGGTCACCGGGAATTGGAGGACAACAGCAGCAGCAACAATTAGTGCCAGATCCTAACTCATCTCTGTTTCATGGAGTGCCTCAAAATCTTCTGAATTCATGCCAATTACCAGCTGAGGGTTACTGGGGTGGCAGTTCTCGTCCTCCTTTTTAA 891 0.5275 MDPVAAQGRPLPPPFLSRDLHLHSHHQFQQPHHNHQNNEDHEQNGNNGSINRSQKRDRDENTTAATEDGKEFGQGGEGEITRRPRGRPAGSKNKPKPPIIITRDSANALRSHVVEVANGCDIMESISTFARRRQRGVCILSGSGTVTNVTLKQPASPGAVLTLHGRFEILSLSGSFLPPPAPPTASGLAIYLAGGQGQVVGGIVVGPLLASGPVVIMAASFGNAAYERLPLEEEEAAVAVPGSGELGSPGIGGQQQQQQLVPDPNSSLFHGVPQNLLNSCQLPAEGYWGGSSRPPF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1083 296 MobiDBLite consensus disorder prediction 249 272 - -
Glsi07g1083 296 Gene3D - 109 239 - -
Glsi07g1083 296 ProSiteProfiles PPC domain profile profile. 106 242 IPR005175 -
Glsi07g1083 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 267 IPR014476 GO:0003680
Glsi07g1083 296 MobiDBLite consensus disorder prediction 241 272 - -
Glsi07g1083 296 FunFam AT-hook motif nuclear-localized protein 109 236 - -
Glsi07g1083 296 MobiDBLite consensus disorder prediction 52 86 - -
Glsi07g1083 296 SUPERFAMILY AF0104/ALDC/Ptd012-like 106 242 - -
Glsi07g1083 296 MobiDBLite consensus disorder prediction 19 40 - -
Glsi07g1083 296 PIRSF ESCAROLA 17 295 IPR014476 GO:0003680
Glsi07g1083 296 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 222 IPR005175 -
Glsi07g1083 296 CDD DUF296 110 193 IPR005175 -
Glsi07g1083 296 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1083 Glsi-ChrGlsi07 14673127 14674017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1083 1 296 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 62.848 7.70e-89 266